Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1124 ATGTACAGATCAGCAACTTCATCATCCAGAATTTTAAACCATCTCAAGGGCCATGGAAGCAACTTGGGAGCTTCTAGGTTTGCAACTTCAGCTGCAGTAGCTTCAAGGGCTTCTTCAGGTGGTTTGTTTAGTTGGCTTACCGGGGAGCGTTCTAGTTCTCTTCCTCCATTGGACACACCACTTGGAGGTGTTGCTCTCCCTGAGCCACTACCAGATCATGTTGAACCAAGCAAGACCAAGATCACAACTCTCTCCAATGGTCTCAAAATTGCATCGGAGACCTCACCGAACCCTGCAGCCTCAATTGGGTTATATCTTGATTGTGGTTCCATCTATGAGACACCATTGTCGAGCGGGGCTTCGCACTTGCTAGAGCGAATGGCTTTCAAGAGCACAACAAACCGTAGTCACTTCCGTATTGTAAGGGAGGTAGAAGCAATTGGTGGTAATATAGGTGCTTCAGCTTCTCGGGAGCAAATGGGCTATACATTTGATGCTTTAAAGACCTATGTTCCTCAAATGGTTGAATTGCTGGTTGACTGTGTAAGGAACCCGGCTTTCTTGGATTGGGAGGTCAACGAAGAGCTACGTAAGGTGAAAGCCGAGCTTGGAGAACTCTCAAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCGGCTGGTTATTCCGGTTCATTGGCTTATCCTCTTTTGGCTCCTGAAGCAGCACTGAACAGATTGGATGGCCCCAGTTTAGAAGAATTTGTTGCTGAGCATTACACTGCACCTAGAATGGTACTTGCAGCATCTGGTGTTGATCATGAAGAACTTTTATCTGTTGCTGAGCCACTTCTCTCTGATCTACCAAATGTCCCCCGTCCTGAAGAACCAAAGTCTAACTATGTCGGTGGTGATTTCCGACGCCAAGGTGAATCAGGGGGTGCACATGTTGCTATTGCTTTTGAAGTGCCAGGTGGATGGCAAAAAGAGAGAGATGCTATAGTTTTGACTGTTCTTCAGATGCTTATGGGAGGAGGTGGATCATTCTCCGCAGGGGGCCCTGGGAAAGGGATGCACTCACGACTATATCTTCGTGTGTTGAATGAATATCAACAGATTCAATCATTTTCTGCATTCAACAGTATCTTCAACAATACAGGACTCTTCGGCATTTATGCAAGCACTAGCTCTGATTTTGTGGCAAAAGCTGTGGATATAGCAGCCAAAGAACTATTAGCAATTGCATCACCTGGACAAGTTTCACAGGTACAGTTTGACCGTGCCAAAAAATCCACGAAGTCAGCAGTTCTAATGAATCTGGAATCTAGGATGATTGCATCAGAAGATATTGGAAGGCAGATTCTGACTTATGGAGAAAGGAAGCCTGTGGAGTTGTTCTTGAAGGCTGTAGATGAAATCACTTTGAATGATATAACTAAAATTGCTCAGAAGATTATTTCTTCACCTTTGACCATGGCATCATATGGAGATGTTCTTAATGTCCCAAGTTATGAATCTGTTAACAGCAAGTTCCATTCCAAGTGA 1527 0.4473 MYRSATSSSRILNHLKGHGSNLGASRFATSAAVASRASSGGLFSWLTGERSSSLPPLDTPLGGVALPEPLPDHVEPSKTKITTLSNGLKIASETSPNPAASIGLYLDCGSIYETPLSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGSLAYPLLAPEAALNRLDGPSLEEFVAEHYTAPRMVLAASGVDHEELLSVAEPLLSDLPNVPRPEEPKSNYVGGDFRRQGESGGAHVAIAFEVPGGWQKERDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSSDFVAKAVDIAAKELLAIASPGQVSQVQFDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPVELFLKAVDEITLNDITKIAQKIISSPLTMASYGDVLNVPSYESVNSKFHSK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1124 508 Pfam Peptidase M16 inactive domain 245 424 IPR007863 -
Lal20g1124 508 PANTHER METALLOPROTEASE 17 508 - -
Lal20g1124 508 SUPERFAMILY LuxS/MPP-like metallohydrolase 78 288 IPR011249 GO:0046872
Lal20g1124 508 Gene3D - 293 504 - -
Lal20g1124 508 ProSitePatterns Insulinase family, zinc-binding region signature. 109 132 IPR001431 GO:0004222|GO:0006508
Lal20g1124 508 Pfam Insulinase (Peptidase family M16) 90 234 IPR011765 -
Lal20g1124 508 Gene3D - 68 281 - -
Lal20g1124 508 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 17 508 IPR037715 GO:0006627
Lal20g1124 508 SUPERFAMILY LuxS/MPP-like metallohydrolase 301 499 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1124 Lal-Chr20 15544050 15549648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1124 K01412 - gmx:100794691 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1124 20 15544050 15549648 Lal20g1124 20 15544050 15549648 ECH
Lal20g1124 20 15544050 15549648 Lal1g1339 1 15148009 15152878 LSH