Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1115 ATGGGTAGTTCGGGAGAGTCTAATAGCATCGATGCAACGGTGGGTGGGTTGGTATGGGTGCGGCGGAGAAACGGGTCATGGTGGCCGGGTCGGATAATGGGTTTGGATGAATTGGCTGAGACTTGTTTGGTTTCGCCGAGATCGGGTACTCCGGTCAAGCTCTTAGGTCGTGAAGATGCAAGCGTGGATTGGTATAATCTTGAAAAGTCAAAGCGAGTAAAAGCCTTTCGTTGTGGAGAGTATGATGAATGCATTGAGAAGGCGAAAGCGTCTGCTGCTAGTTCAAACAAGAAAGCAGTGAAATATGCTCGAAGGGAAGATGCTATTCTTCATGCTCTTGAGATAGAGAGTGCTCACATAGACAAGGAACCATTAAATTCATGTTCTGCATCAGATAAATCTGGCAGTGAACGCGGTGGCTCAGTTGGAGAATTACCGGTCATATCTAATTCTGGTGATGATAATGAAGATGTGAGCGATGATCTGAGCGACGCTGGAGACAATTCTAATTCAGCTCCAGAGTTGTCACAATCTGGTATATCTTTTGAAGAGCCAAATCACAATGGTTCTTTAAAAATGGTGAACGGAAGGATGAGAAAAACACCTAATGATTCCGAAGATGATGGAACTGAGGGAGTTAAGCGAATGAGAGGACTCGAGGACTTGGGCGTTGGTGTTGTGTCAAAGAGAAAGGTTCGGGGACAGGGCACAGATACAACTGAGATGGTTCAGCATGTTAGTGCTTCACTTAGCAATTCAACCACAAGAAACTGCTTGCCAAATGGAACTTCGGTAAATGTTGGGAAGGGTTGTTCTTCGACGATGAAAAGAAAGAGATCACAAGTAACGAATGTTCATGAATTTCTTAAAAGGAAAAATCGGCGCCGACCTTTGACAAAGGTATTGGAGAGTACAACAATGGTATCGGTTCCAGTCATTTGTGACCAACTTCCTAGTTCAAGCAATTTTCCTCTATGTGAGACACTTGATAGAAGGATTTCAACATTAAATTCTAATAATTCAAAGAAAAGTTCTTCTTCGGCAACTCATGATTCAGATAGTACTGGAGCTGGACATGAGAATGAGACTTCATTAAATGTTCATGACCTTGACAATGATACTTCCCAAATCAGTCACAAGGTCAAGGAGAATAATTCTGATAAATTATTCGATGTTCCCGTTGTTAAGGTTCTAGAGGAGGAGAAACATGCTCCAGGTTTCTCTCCCATACTTGTTACTTGTTCATCTGAAAAGTCTGAAGTTGGTGCACTGGGGCAGCAAGTTTGTCATGGTGGACAGTCTGGAGCTCCGTCGTTGAGAAACGAATTTGGTTGCACTAGTTCAACGGCCGGTTACGATATTATTGGCAATGGAGCAGAGAAAGATAGTTCGAAGTGGCAGTCGAAAGGAAAGAGGAATCTTAGACATCTGAGTAAAAATAGAAAGCACGTGTCGAGAAATCATGTGGACATGAATCATGAATCGAGTGCTTATTTGGCAGGTATAGAGAACACAAGTGAGTTCACTCAGGGTGTCGGTGAGAAACTTGGTTGGAGTGGCAAGGGTGCACTCAATGCATCGTACAATTGTGATTCTAAAATTAATCGCAAACCTGTTGCTGAATGCCAACGAGATGGATTTCGGGACTCGAGCAAGCATATAAAGGGGACAACATCAAAGGCGAAATTGTTGGCCGATGGATCTCTCACACCTCAGAGGCTGCTTCCTTATCGTCATTCGCGCTTTACCACTAACTCTAAATACCGAACGGTCGATATTCCTGGAAGAAATTGTTGCTCTGATGGCTCGTTATATGATGTTAAACTAGAAGTTAAATCCAGCTACCGACCACAACATGTCCCTTTAGTTTCTCTTGTGAGTAAACTGAACGGAAAAGCCTTCGTTGGACATCCTTTGACAGTTGAGGTTTTGGATGATGGTCATTGTGATAAAGTGTTGAATGACATTGGATGTGACTCAGAAGTCGGCAACATCTGTAGCGTGGCCAAGTTGAACTCAGTAACTCGGAGAACACCCTTCAAGAATTCGTCACACAAATCACATGGTAAATCTTCCAAACATAAAAAATCCGGGCTGTTGAATAAAAAGACTAGGAAACTATCGTCACTGACTGGTCAAAGGCGGCAATCAGAAGAGAGAAAACCAATGGTAGATAAGCTCAAGGGTCCTGTTATAGCTTGTATTCCCCTTACATTAGTATTCAGTAGGATACATGAAGCCGTGAGCGGTCAGGCACGGGCGACGACACACCGTGCATTACTAACAACCGATCGGTGA 2298 0.4343 MGSSGESNSIDATVGGLVWVRRRNGSWWPGRIMGLDELAETCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAASSNKKAVKYARREDAILHALEIESAHIDKEPLNSCSASDKSGSERGGSVGELPVISNSGDDNEDVSDDLSDAGDNSNSAPELSQSGISFEEPNHNGSLKMVNGRMRKTPNDSEDDGTEGVKRMRGLEDLGVGVVSKRKVRGQGTDTTEMVQHVSASLSNSTTRNCLPNGTSVNVGKGCSSTMKRKRSQVTNVHEFLKRKNRRRPLTKVLESTTMVSVPVICDQLPSSSNFPLCETLDRRISTLNSNNSKKSSSSATHDSDSTGAGHENETSLNVHDLDNDTSQISHKVKENNSDKLFDVPVVKVLEEEKHAPGFSPILVTCSSEKSEVGALGQQVCHGGQSGAPSLRNEFGCTSSTAGYDIIGNGAEKDSSKWQSKGKRNLRHLSKNRKHVSRNHVDMNHESSAYLAGIENTSEFTQGVGEKLGWSGKGALNASYNCDSKINRKPVAECQRDGFRDSSKHIKGTTSKAKLLADGSLTPQRLLPYRHSRFTTNSKYRTVDIPGRNCCSDGSLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFVGHPLTVEVLDDGHCDKVLNDIGCDSEVGNICSVAKLNSVTRRTPFKNSSHKSHGKSSKHKKSGLLNKKTRKLSSLTGQRRQSEERKPMVDKLKGPVIACIPLTLVFSRIHEAVSGQARATTHRALLTTDR 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1115 765 PANTHER T17B22.17 PROTEIN-RELATED 1 760 IPR044679 -
Lal20g1115 765 MobiDBLite consensus disorder prediction 164 185 - -
Lal20g1115 765 Pfam PWWP domain 16 105 IPR000313 -
Lal20g1115 765 MobiDBLite consensus disorder prediction 677 723 - -
Lal20g1115 765 Coils Coil 700 720 - -
Lal20g1115 765 MobiDBLite consensus disorder prediction 461 492 - -
Lal20g1115 765 Gene3D - 3 117 - -
Lal20g1115 765 MobiDBLite consensus disorder prediction 124 212 - -
Lal20g1115 765 MobiDBLite consensus disorder prediction 337 369 - -
Lal20g1115 765 ProSiteProfiles PWWP domain profile. 14 69 IPR000313 -
Lal20g1115 765 SUPERFAMILY Tudor/PWWP/MBT 13 117 - -
Lal20g1115 765 MobiDBLite consensus disorder prediction 681 702 - -
Lal20g1115 765 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 1 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1115 Lal-Chr20 15374093 15379324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1115 - - gmx:100791879 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1115 20 15374093 15379324 Lal20g1115 20 15374093 15379324 ECH