Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1079 ATGGAAATGGTAAGAATGAGATCTTTCAACTATGAGGAAGGAGAGAAAATATTGAGAACAATGAGTTTCAAGAAAGGAAGAGAAAATGATGATTTGTATAATCATGATGAGTTAAATGAGGTTATTACTGAAGAATCTACATCATCAAAGAGAAGAAAAGTTGGAAATTTGAAGCTTCAAACCACATTCTCATTCAAATATTTGCTTTCAGAGAATTCTAGTTCAAAGGTGGAAGTTGTTGACTCATTCAACAATTTATTACCCAAACCAGAAATTTGGTTTTCACCAAAATCAATTGGGGAGCTTGATGTAGCTGCAATAAAAGTGCAGAAAGTTTATAAGAGCTACAGGACTAGAAGGAATCTAGCAGATTGTGCAGTTGTTTGTGAGGAACTATGGTGGAAGGCTTTAGATTTTGCTTCTCTTAGTAGGTGTTCTATTTCACATTTTGACTCTCATAAGTCAGAAACAGCTGTTTCAAAGTGGGCAAGAGCTAGGACCATGGCTGCTAAGGTAGGAAAGGGTTTGTGCAAAGATGATAAGGCACAAAAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCACGTCATCGTTATGGGCATAACTTAGACTTCTATTATAATGTATGGTTTCATAGCCAGAGTTCTCAGCCTTTTTTCTACTGGTTGGATGTTGGTGATGGAAAAGAGGTGAATCTTGAGAATTGCCCAAGAAGTAACTTACAAGGACAATGCATAAAATACCTTGGACCCAAAGAGAGAGAAGCATATGAAGTGATTGTGGAGGGAGGAATGCTTCTTTATAGAAAAAGCAATGACCTTGTTCACACTTTTGAAGGGTCTAAGTGGATTTTTGTTCTAAGTTCTTCTAGAATTTTGTATGTTGGTGAAAAGAAAAAAGGCCAATTTCAACACTCAAGTTTTCTAGCTGGTGGTGCTACCATTGCATCCGGAAGATTGGTAGCCCAAAATGGAGTTCTTGATGCTATATGGCCCTATAGCGGTCACTACCGTCCTACTGAGAAGAATTTTAAGGAATTCATTGGCTTCTTAGTGGAACATAATGTGGACATGACAAGTGTAAAGAAGTATGCAGTAGATGATGATGTCCCACCTTCTAAACCTATTGATGAGGAGCTGCATTATGAGCCCACGAAGGGTAATGTGGGTCCAAGTGACTCTACCATTGGCAATAATTGTGGCCAAGATAATGTGGGTCACTTTGATAACTATGTGAAAACTTCACAAGTTAAAGAGATGAAGCCATTGTCAAGCAAATGGACTACTGGAGCTGGTCCTAGAATTGGTTGTGTGAGAGAGTACCCTACAAAACTTCAAGTTAAGGCACTTGAACAACTCAATCTATCACCAAGAGTCAACCATGCAAAATTTGATGCAAAGGCACCCATTCCCTCACCAAGACCTAGTTCAAAAATCCATCTATCCCCTAGGCTTGTGCAAATGGGAATTCCTATCCCAAGAGGACATGTTAATCCAACAAATTAG 1509 0.3877 MEMVRMRSFNYEEGEKILRTMSFKKGRENDDLYNHDELNEVITEESTSSKRRKVGNLKLQTTFSFKYLLSENSSSKVEVVDSFNNLLPKPEIWFSPKSIGELDVAAIKVQKVYKSYRTRRNLADCAVVCEELWWKALDFASLSRCSISHFDSHKSETAVSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLDFYYNVWFHSQSSQPFFYWLDVGDGKEVNLENCPRSNLQGQCIKYLGPKEREAYEVIVEGGMLLYRKSNDLVHTFEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVAQNGVLDAIWPYSGHYRPTEKNFKEFIGFLVEHNVDMTSVKKYAVDDDVPPSKPIDEELHYEPTKGNVGPSDSTIGNNCGQDNVGHFDNYVKTSQVKEMKPLSSKWTTGAGPRIGCVREYPTKLQVKALEQLNLSPRVNHAKFDAKAPIPSPRPSSKIHLSPRLVQMGIPIPRGHVNPTN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1079 502 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 3 499 - -
Lal20g1079 502 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 3 499 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1079 Lal-Chr20 14873313 14879169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1079 - - ccaj:109809343 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1079 20 14873313 14879169 Lal8g0288 8 1941463 1944503 PCT