Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1045 ATGGTCACTGGTTCAAGAATGGAAGTTGTGAGTGGCACACAAATTTTCTCTGCTAAAGTCCGCAAAACCATTCAATCCATCAAAGAAATCGTGGGTAATCATTCTGATGCTGATATCTATGTTGCCCTCAAGGAAACTAACATGGATCCTAATGAAACTACTCAGAAATTGCTCTTCCAAGATCCATTCCATGAGGTGAAGAGAAGGAGAGACCGAAAGAAGGAGCCTCAGAATCAGAATGTTGGGAATAAGAGCTCAGCTGAGCGGTCTGAGCCACGAAGACATTCTGAGAGTGTTGGTGTTGGTCAAGGAATGAAATTTCATGCCCCTTATGAACGTAATTTTCGAAGAGCAAACTACTCTCGGAATACTTTACCTGGCAATGGTAGAGAGTTCCGTGTTGTCAGAGACAACAGAGTAAATCGTATATATAAAGAAGTAAAGCCTCCTTCACCGCAATGCTCCACATCCACCAATGAGCAATCAAATGCAAAATCATCTGAGAAGGGCTCAACAACAGCTGTTACCAATCAAAGGTCATCCGGTGTTAGGAATTCATCTCAAGCTCTAAATGGTCCTTCTGATTCACATGCTAGAAGCTCTAAAGATGCTGTTTCAAATGCCAGTGACAGAAAATTTGCATCCGAGGGGAAGCAGAGTGTTGTTTTGAATGCAACAGCTAGAGTGCAGTCAACTAAGCCTAACAGCACCCAGCAAAATTCTACAACGGTGGCTTCAACTAGTTCTGCTGTTGGGGTGTATTCCTCTTCAACAGATCCAGTTCATGTGCCCTCTCCTGATTCCAGAGCATCCGGTGTTGTTGGGGCCATTAGGCGTGAAGTTGGTGTTGTTGGTGTTCGGCGACAGTCTTCAGACAACAAAGTGAAACAATCATCTGTTCTCAGTAATTCTCATATTGGAAAAGCTGGCACACTTGCAAATTCATTTCAATCTGTTGGTGTTCTCTCAAAGACTGAACAAATTAGTCAAACTAATGTAAACGAACCTTCATTCTCTGGCATATCAGTTGGCAGGCCGTCCGTGAATAACCAATATAATAATAGGCCACATCAACCCGTGGGGCATCAGAGAGCTTCCCAGCATAATAAAGAGTGGAAACCTAAATCAAGCAAGAAGTCGAGCGGTAACAGTCCTGGAGTGATTGGAAAACCTAAAAAAGCTGCTTCACCTACAGCTAAAAATTCTAGAGATGTTGAATCAAATACAGCAGAGCTTCAAGAGAAACTTTCCCAAGCTAATATATATGAGAACAAAAATGTGATCATCGCACAGCATATTCGAGTTCCAGAGACTGAGCGCTGCCGGCTGACATTTGGTACCATTGGGACAGAAATTGACTCTTTGAGGGTTCAACCTGAGCATCAATTAACAGAAGCTTCTGAAAAATCAAACGATGAATCTACTGCGAGCTTGACAGAACCTCCTCAAGAGCTGTCCACTGATGATGTTTCTGGGAGCAAACAGGTTGACTTACAGGAGGATCATGTTAGAAGTACTGAGTCGGTCTCTCCAGCATCTGATGCTACTGTTGAGCAACAATTGCCTGATAAAAAAGTCTCATCCACTCCTCAGAATCTCGAAAATTATGCTAATATTGGATTGGTACGTGATAATGTTCCATCCTATGCACCTTCAGAGTCACATCAGCAAGATTCTCATGATATGCCAGGCTTCTCGGCATATGATCCTCCGACTGGTAATGAAGTTCCTTATTTCAGACCTGCAGTGGATGAATCTGTACGAGAGCAAGCTCTGCCATCTCCGCATGAGGGTTTGAGCTCCCATGCAGCCAATAACATTCCTGCGTCTGCGATACCCTTGATTCCACAACAACCTCCTATTGCGCAGATGTATCCACAAGTTCATGTTTCACATTATGCTAACCTTATGCCGTATCGCCAGTTTCTGTCACCGGTCTATGTTCCACCTATGGGCATGCCTGGATATTCAAGTAATCATCCCTATCCTCATCCATCAAATGGAAGCAGTTACGTGTTGATGCCTGGAGGCGGTTCCCATCTTAATGCCAACAGCCTTAAATATGGAGTTCAGCAGTTCAAGCCTGTTCCCACCGGAAATCCTGCAGGCTTCGGAAATTATGCTAATCCAACTGGGTATGCCATGATATCACCTGGCGTGGTTGGTGCTGCACCGACTTTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTCCCAAATCCTCAGGCTGAGACATCGGAAATCTGGTTACAGAATCAAAGGGAAATTCCTGGCATGCAATCCACTCCATACTATAACATGCAAGGGCAAGCGGCGCATGGTGCGTACATGCCGTCGCACACTGGTCATGCTTCCTTCAATGCAGCTGCAGTTCAGTCTTCTCGCATGCAGTTCCCGGCCATGTATCATGCTCCTCCACAGCCGGCGGCAATTCCTGGTCCTCACCTCTTAGGACCACCAATGGGAAATAATGTTGGAGTCGGGGTGGCCGCAGCTGCTCCCGGAGCACAGGTTGGTGCATATCAGCAGCCCCAAATGGGTCACCTCAATTGGACAACAAATTTCTGA 2577 0.4505 MVTGSRMEVVSGTQIFSAKVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLFQDPFHEVKRRRDRKKEPQNQNVGNKSSAERSEPRRHSESVGVGQGMKFHAPYERNFRRANYSRNTLPGNGREFRVVRDNRVNRIYKEVKPPSPQCSTSTNEQSNAKSSEKGSTTAVTNQRSSGVRNSSQALNGPSDSHARSSKDAVSNASDRKFASEGKQSVVLNATARVQSTKPNSTQQNSTTVASTSSAVGVYSSSTDPVHVPSPDSRASGVVGAIRREVGVVGVRRQSSDNKVKQSSVLSNSHIGKAGTLANSFQSVGVLSKTEQISQTNVNEPSFSGISVGRPSVNNQYNNRPHQPVGHQRASQHNKEWKPKSSKKSSGNSPGVIGKPKKAASPTAKNSRDVESNTAELQEKLSQANIYENKNVIIAQHIRVPETERCRLTFGTIGTEIDSLRVQPEHQLTEASEKSNDESTASLTEPPQELSTDDVSGSKQVDLQEDHVRSTESVSPASDATVEQQLPDKKVSSTPQNLENYANIGLVRDNVPSYAPSESHQQDSHDMPGFSAYDPPTGNEVPYFRPAVDESVREQALPSPHEGLSSHAANNIPASAIPLIPQQPPIAQMYPQVHVSHYANLMPYRQFLSPVYVPPMGMPGYSSNHPYPHPSNGSSYVLMPGGGSHLNANSLKYGVQQFKPVPTGNPAGFGNYANPTGYAMISPGVVGAAPTLEDSSRVKYKDNLYVPNPQAETSEIWLQNQREIPGMQSTPYYNMQGQAAHGAYMPSHTGHASFNAAAVQSSRMQFPAMYHAPPQPAAIPGPHLLGPPMGNNVGVGVAAAAPGAQVGAYQQPQMGHLNWTTNF 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1045 858 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 858 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 456 532 - -
Lal20g1045 858 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 858 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 327 363 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 327 410 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 61 78 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 61 105 - -
Lal20g1045 858 Pfam GBF-interacting protein 1 N-terminal 18 75 IPR009719 -
Lal20g1045 858 MobiDBLite consensus disorder prediction 545 564 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 150 203 - -
Lal20g1045 858 SUPERFAMILY UBA-like 18 78 IPR009060 GO:0005515
Lal20g1045 858 MobiDBLite consensus disorder prediction 469 493 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 143 219 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 505 532 - -
Lal20g1045 858 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1045 Lal-Chr20 14255521 14264887 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1045 - - lang:109334057 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1045 20 14255521 14264887 Lal20g1045 20 14255521 14264887 ECH
Lal20g1045 20 14255521 14264887 Lal1g1377 1 15804938 15823224 LSH
Lal20g1045 20 14255521 14264887 Lal18g0325 18 2735979 2744294 LSH