Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0525 ATGGCTGCTCAATTGCAAAAAAGTAATTCCTTTTTCTTTTCTGCTATGTTCTTTTGTTTTCTTGATATTATGCATGCTTCTGATGAAATGAATATGAAGAGGCACCATGGTGATTCTTCAACATCTGAACTCAATAATTCCAATATGGTTCCTTCAAAGGGTGCAAATTCCCCATCTGATGCAAGATCATGTGTATCATCTATAGGAGATGCATCTGGTAGTGTTAAAGAAGGGGATGTGGATCATGAGTACCTTTCCACAGATCAAAGTGTTCCTTATACTGCTGGTGGCTATTATGGATACTACTATCCAGGTTATGGTGCTTTCTATGGAGATTCAGACAGCCAAGGATACTATGTTGGTGCTGATGCAATGGATCTTCAGTATCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGGATATCAGACTGGCTACTCTTCGTACTTTCCTCTGAGTCCAACAGTTGTTGATGGACAGTATGTGTACCCCCCTGGCTCAATCATTCAACAACCCCTTGGTTCACCCGGATATTTTCCAGCTTCTCTACCTTATGGCGAGTTTATGCCGTCAGCATACACGTGGGATTCGTCTCGAACCATGCAAGATGGGTCACAAGGAAACGGTTATAATGAAATTACCGGGAAACCAAGTGGTAGATCTAATTTTTCTTCACAGAATCATGCAAATAGCTTTGTGTCCAAGTCTGCACCTCCACCTAACCTTAGCAACCAATCAGAAGTGAAGGGTTCCTCGACATTGTTAGATGTCTCCTCAACTCATGCGAACCGCATCCAGCCAAAACATGTAAACAAGGCACCAATTCTCCATTCAGATATGACGGCAAAGGGCTGCTTGCCCATTACCAAATTTCCCGCATACAATCAAGGAAAGACTGGATTCCTTTATCCGAACAACTTGCTTAATGTGAAGTCAAACACAAAGGGTTGGGTTAGTACTGATAAGTTAAAACTGAGAAGCAAGGTTGGTGGTCCACTTAATGATCAGAATCAGGGTCCTAGAACGTCTAATGCAAAAGGTGCGTCAATATCCGGAGATAATTCAGCGGGATCCTTGCCTGTAGATGGAAGTGGAACTGGCAGCAGCAAAATCAGGATAGATCAATATAACCTACCAGATTTTCCAACCAAATATGATCACGCACTATTTTTTGTCATCAAATCATACAGTGAAGATGATATACATAAGAGCATTAAGTACAATGTTTGGGCTAGTACTCCTAATGGCAATAAGCGACTGGACAGTGCATTTCAGGATGCACAGAAGCGGATGGAAGACAAAGGAAACAAGTGCCCTGTGTTCCTTTTCTTTTCGGTCAATGCTAGCGGTCAATTTTGTGGAATTGCTGAAATGATTGGACCTGTTGACTTCAATAAAAGCATGGACTTTTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCACATCATAAAAGATGTTCCAAATCCTCTGTTACGCCATATAATACTTGAGAATAATGATCACAAGCCTGTCACAAATAGTAGAGATACACAAGAGGTGAGTTTTCCACATGGTGTTGAAATGCTCAATATATTCAAGAACTATGTGGCAAAAACATCCATATTAGACGACTTCGAATTTTATGAAAGCCGACAGAAGGTAATGCAGGAGAAGAAAGTAAGACAATCCATGCCCCATACCAGTGAACAAGTATTGTCTTATACTGCCATCTTAATACTAGACTCTTACCAACACATAGATGAACTTAGCACTGCACTTGAGTCAGTAGATCTATCAAGTACCAAGAACAAGGAGGATCCCAAGTTGGTAGAGAAAGTAATAAAGGACTGA 1854 0.4083 MAAQLQKSNSFFFSAMFFCFLDIMHASDEMNMKRHHGDSSTSELNNSNMVPSKGANSPSDARSCVSSIGDASGSVKEGDVDHEYLSTDQSVPYTAGGYYGYYYPGYGAFYGDSDSQGYYVGADAMDLQYPVMQADNGSYVYLMPGYQTGYSSYFPLSPTVVDGQYVYPPGSIIQQPLGSPGYFPASLPYGEFMPSAYTWDSSRTMQDGSQGNGYNEITGKPSGRSNFSSQNHANSFVSKSAPPPNLSNQSEVKGSSTLLDVSSTHANRIQPKHVNKAPILHSDMTAKGCLPITKFPAYNQGKTGFLYPNNLLNVKSNTKGWVSTDKLKLRSKVGGPLNDQNQGPRTSNAKGASISGDNSAGSLPVDGSGTGSSKIRIDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDSAFQDAQKRMEDKGNKCPVFLFFSVNASGQFCGIAEMIGPVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPLLRHIILENNDHKPVTNSRDTQEVSFPHGVEMLNIFKNYVAKTSILDDFEFYESRQKVMQEKKVRQSMPHTSEQVLSYTAILILDSYQHIDELSTALESVDLSSTKNKEDPKLVEKVIKD 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0525 617 Gene3D ph1033 like domains 371 548 - -
Lal20g0525 617 MobiDBLite consensus disorder prediction 201 254 - -
Lal20g0525 617 MobiDBLite consensus disorder prediction 32 80 - -
Lal20g0525 617 ProSiteProfiles YTH domain profile. 392 533 IPR007275 GO:0003723
Lal20g0525 617 MobiDBLite consensus disorder prediction 41 70 - -
Lal20g0525 617 PANTHER OS01G0679900 PROTEIN 32 606 - -
Lal20g0525 617 MobiDBLite consensus disorder prediction 335 370 - -
Lal20g0525 617 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 32 606 IPR045168 -
Lal20g0525 617 Pfam YT521-B-like domain 394 534 IPR007275 GO:0003723
Lal20g0525 617 MobiDBLite consensus disorder prediction 331 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0525 Lal-Chr20 4545429 4549869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0525 K20102 - gmx:100791190 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0525 20 4545429 4549869 Lal20g0525 20 4545429 4549869 ECH
Lal20g0525 20 4545429 4549869 Lal1g1525 1 17413737 17418408 LSH