Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1525 ATGGCTGCTCAATTGCAAAAAACTGATGATGAAATGAATAGGAAGAAGCATCATGGTGATTCTTCAACAGCTGAACTCAACAAATCCAATTTGGTTCCTACTAAGGGTGCAAGTTCTCCATCTGATGCAAGATCATGTGTATCTTCTATAGGAGATGCATCTGGTAGTGTTAAAGAAGGGGATGTAGATCATGATTACCTTTCCACAGATCAAAATGTTCCTTATAATGCTGGTAGTTATTATGGATACTATTATCCAGGTTATGGTGGTTTCTATGGAGATTCAGACAACCAAGGATACTATGTTGGTGCTGATGCAGTGGATCTTCAGTATCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCGTGCCAGGATTTCAGACTGGCTACTCTTCATACTTCCCTCTGAGTCCAACCGGTGTTGATGGACAGTATGTGTACCCGTTTGGTTCCATCTTTCAACAACCCCTCGATTCACCTGGATATTTTCCGTATGGGGATTTTATGCCATCAACATATTTGTGGGATTCGTCTTTAACCACACAAAATGGCTCACAAGGAAATGGGTATAATGAATTTGCTGGGAAACCAAGTGTTCGACCTAATCTGTCTTCGCGGAATCACGGAAATAGTTTTATGTCGAAGTCTGCACCCCTACCTAACTTGAGCAACTCATCGGATGTGAAAGGTTCTTCAACATTGTTAGATGTCTCGTCAACTCATGTTAAGCGCAACCAGCCAAAACAAGTAAACAAGGCACCGGTCCTCCATTCAGATACGATCTCAAAGGGCTGCTTACCCGTTACCAAATTCCCGGCGTACAATCAAGGGAAGAGTGGATTCCTCTATCCGAACAACTTGCTTAATGTGAAACCACACGCAAAGGGTTGGGTTAGTACTGATAAGTTAAAACTAAGAAGCAAGGACGATGATCCACTTAATGAGAAGAGTCAGGTTCCTAGTACAGCTAATGAAAAAGGCCCATCAGTATCCGGATTTAATTCAGCTGGAACCTTGGCTCCCGATGAGAGTGGAACTGGTAGCAGCAAAATCAGGACTGATCAATATAACCTACCTGATTTTCCAACCAAATATGATCGTGCACTTTTTTTTGTGATCAAATCATACAGTGAAGATGATATACATAAGAGCATTAAATACAACGTGTGGGCGAGTACTCCTAATGGCAATAAACGACTCGATAGTGCATTTCAGGATGCACAGAAGCGGATGGAAGAAGAAGGAAACAAGTGCCCCGTGTTCCTTTTCTTTTCGGTCAACGCTAGTGGTCAATTTTGTGGAATAGCTGAGATGATTGGGCGAGTTGATTTCAGTAAAAGCATGGACTTCTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCACATTATAAAAGACGTTCCAAATCCTCGGTTACGGCATATAATACTTGAGAATAATGATCACAAGCCTGTCACAAATAGTAGAGATACACAAGAGGTGAGTTTTCCCCATGGTCTTGAAATGCTCAACATTTTTAAGAATTATGTCGCCAGAACTTCCATATTAGATGACTTCAAATTTTATGAAAGCCGACAAAAGGTAATGCAGGAGAAGAAAGTAAGACCTTCCATGCCCCATACCAGTGTACAGCACATAAATGAATTAAGCACTGCACTTGAATCAATAGAACTATCAACTACAAAGAACAATGAAGATCCTAAGTTGGTTGAGAAAGTTAAGGATTGA 1743 0.4085 MAAQLQKTDDEMNRKKHHGDSSTAELNKSNLVPTKGASSPSDARSCVSSIGDASGSVKEGDVDHDYLSTDQNVPYNAGSYYGYYYPGYGGFYGDSDNQGYYVGADAVDLQYPVMQADNGSYVYLVPGFQTGYSSYFPLSPTGVDGQYVYPFGSIFQQPLDSPGYFPYGDFMPSTYLWDSSLTTQNGSQGNGYNEFAGKPSVRPNLSSRNHGNSFMSKSAPLPNLSNSSDVKGSSTLLDVSSTHVKRNQPKQVNKAPVLHSDTISKGCLPVTKFPAYNQGKSGFLYPNNLLNVKPHAKGWVSTDKLKLRSKDDDPLNEKSQVPSTANEKGPSVSGFNSAGTLAPDESGTGSSKIRTDQYNLPDFPTKYDRALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDSAFQDAQKRMEEEGNKCPVFLFFSVNASGQFCGIAEMIGRVDFSKSMDFWQQDKWNGYFPVKWHIIKDVPNPRLRHIILENNDHKPVTNSRDTQEVSFPHGLEMLNIFKNYVARTSILDDFKFYESRQKVMQEKKVRPSMPHTSVQHINELSTALESIELSTTKNNEDPKLVEKVKD 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1525 580 MobiDBLite consensus disorder prediction 8 23 - -
Lal1g1525 580 MobiDBLite consensus disorder prediction 188 233 - -
Lal1g1525 580 Coils Coil 399 419 - -
Lal1g1525 580 PANTHER OS01G0679900 PROTEIN 20 548 - -
Lal1g1525 580 MobiDBLite consensus disorder prediction 24 52 - -
Lal1g1525 580 Gene3D ph1033 like domains 348 526 - -
Lal1g1525 580 MobiDBLite consensus disorder prediction 309 355 - -
Lal1g1525 580 ProSiteProfiles YTH domain profile. 370 511 IPR007275 GO:0003723
Lal1g1525 580 MobiDBLite consensus disorder prediction 318 355 - -
Lal1g1525 580 Pfam YT521-B-like domain 372 512 IPR007275 GO:0003723
Lal1g1525 580 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 20 548 IPR045168 -
Lal1g1525 580 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1525 Lal-Chr1 17413737 17418408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1525 K20102 - gmx:100791190 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1525 1 17413737 17418408 Lal1g1525 1 17413737 17418408 ECH
Lal20g0525 20 4545429 4549869 Lal1g1525 1 17413737 17418408 LSH