Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0405 ATGGCTAAAGTGAATGTCTCTGTTCTCCTTTTTCTAATGTTCTTTTCTATCACACCAGAGGGGAATCTGGTCATGGCTAATGAACAGAAAACTTGGTGTGTGGCTAAGCCTTCATCAGACCAAGCTACCCTTTTATCAAACATCAATTATGCCTGCTCTCAAGTCGATTGCCGAATTATGCAGAGAGGCTGTCCCTGCTCTTACCCGGATAATCTCATCAATCGCGCCTCGATTGCGATGAATCTCTATTATCAGTCTAAGGGAAGAAACCACTGGAATTGTGATTTCAGAGCCTCTGGCCTTGTTGTTGTAACTGATCCTAGCTATGGTAATTGCATTTATGCATAG 348 0.4282 MAKVNVSVLLFLMFFSITPEGNLVMANEQKTWCVAKPSSDQATLLSNINYACSQVDCRIMQRGCPCSYPDNLINRASIAMNLYYQSKGRNHWNCDFRASGLVVVTDPSYGNCIYA 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0405 115 Gene3D - 24 113 - -
Lal20g0405 115 SMART X8_cls 31 114 IPR012946 -
Lal20g0405 115 PANTHER BETA-1,3 GLUCANASE 7 114 IPR044788 -
Lal20g0405 115 PANTHER GLUCAN ENDO-1,3-BETA-D-GLUCOSIDASE-LIKE 7 114 - -
Lal20g0405 115 Pfam X8 domain 31 99 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0405 Lal-Chr20 3264514 3266157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0405 31 112 Glycoside Hydrolase AT2G05790 42.857 2.72e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0405 - - gmx:100784427 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0405 20 3264514 3266157 Lal20g0405 20 3264514 3266157 ECH
Lal20g0405 20 3264514 3266157 Lal11g1486 11 18082074 18082507 LSH