Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0390 ATGGCGCAAACCCAAACCCTAACCTTTATTCACGAGATCGAATCTCTCGTCTCCGATAAACTTCAAGTGGTTTCTTATAAGTGGCTGAGTCGCAATTATATGATCTCATCCAATGAAGCAAAGAGGTTGCTTCAAGAGTTTGTTGAAAAACATGATGGTGGGTTGGAGGTGGTGTATGCTTTGTCTGGCTGGTTAAAGAGCAGCCATCCAAGTTACCATGTAAAGCTTGCGTCTGCCCCTAAGCTGGAAGAAGCACGACAAGAATTTGATGGGAATTGCTCAGTCCATGTATATAGTGTGCAATCTAGCCTGCCAAAGGATCCAGCTATGCTTTGGGATGCAGAATTTATTCAAGCAGAGGAGCTCTCCAAGCAACCCTTCTCAATTGACAATTGTTTGAGAGATAATAGAATCCCTTCATTTAGTGAAGAATTTGGTCAATGTAAATGCTTATATCAGTTTTCTCTTACTGCTAGGTTTTGTGGGATCTCTAGTTCCTTTGTTTGTCGACGTGTAGATGGCGCAACAGTTGTTTCGGAAGCTCCTCAGACAAAATCTGCAGTAAGCATGGGGCCAACAAAGAAAAACATAGTTTACCTGCCTCCAAAAATCATAGCACATGATTCTATTCCCGAAGTTCTCAAAACACAGGAGGTGATGAAAGATGTCAACAGTGAAAGCAATGGCACTGGGAGTGCAAGAGTTCATAATCACAACAATAAACCTACTGAAGAGAAAGAAAAGGTCCTTCCCTTACCCACAGGCAAAAGGAAAGCACAAGCTGATAAAATCGGTTCTGTTACTGGAGGCTCATTGGCCAGCCTTTGGGGTCGTGCATCTACAAAACCCAAGCCTTGCACTCTGCCAGTAGAAAAAAATAACCCGGTTTCTGATCCTACTGTAGCAACACAAAGCGCCGAAATTCATGCTTGTGAAGCAGGAGAGGGTGATAGCGGTGATGAAGATAATCATATAAATGTTGCTGTAAGAAGATCAACCAATAGGAGGAGGGTTGTCTTTGATTTCTCAGATGAAGATGAAGATGCTGTCAGTTTAGCATCTCCTGAGCCAATAAAACAATCATCTGAAGATGCCAGACAAAATGATAAAAAATCATCAGAGAAAGCAACCTTGAATTTTGACAAGCCGGTAGAAAGTAAATCGAAGGTTGAGGAAGAGACAGAGTGTGACCAAATAGCTAACCAACCATGGAGAGAAGATTTATCCGTTATTAACAAGTGCACAAGAACTGGGAAATCTTCCATTGAGAAGTTGCAGAGCCACACTCCTGAAATTATTGTAAATAAAGATAGTCAAAACAATGCTGCTTCATGTTCACCTAAGAGGAGAAGAGTGATGAAAACCAAGATTGATGAACGAGGGAGAGAAGTAACTGAAGTAGTCTGGGAGGGGGAGAAGACAGAAGCAAAGAAAGCTGATAAGGTTACAACAAAAAAATCTGACAATAATGCTCCTATCAATGTGATCAACAGTGCTCCAGCAACAGAGAAGTCCGCAAATACCATTTTCAATCCTACTGGTAAAGGAGGAACCAAGACGGGTGGAAACTCGAAGGGTTCCAAACAAGGCAATATTCTTTCTTTTTTCAAGAAAGTTTGA 1620 0.4154 MAQTQTLTFIHEIESLVSDKLQVVSYKWLSRNYMISSNEAKRLLQEFVEKHDGGLEVVYALSGWLKSSHPSYHVKLASAPKLEEARQEFDGNCSVHVYSVQSSLPKDPAMLWDAEFIQAEELSKQPFSIDNCLRDNRIPSFSEEFGQCKCLYQFSLTARFCGISSSFVCRRVDGATVVSEAPQTKSAVSMGPTKKNIVYLPPKIIAHDSIPEVLKTQEVMKDVNSESNGTGSARVHNHNNKPTEEKEKVLPLPTGKRKAQADKIGSVTGGSLASLWGRASTKPKPCTLPVEKNNPVSDPTVATQSAEIHACEAGEGDSGDEDNHINVAVRRSTNRRRVVFDFSDEDEDAVSLASPEPIKQSSEDARQNDKKSSEKATLNFDKPVESKSKVEEETECDQIANQPWREDLSVINKCTRTGKSSIEKLQSHTPEIIVNKDSQNNAASCSPKRRRVMKTKIDERGREVTEVVWEGEKTEAKKADKVTTKKSDNNAPINVINSAPATEKSANTIFNPTGKGGTKTGGNSKGSKQGNILSFFKKV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0390 539 Pfam DNA polymerase subunit Cdc27 23 115 IPR019038 GO:0005634|GO:0006260|GO:0043625
Lal20g0390 539 MobiDBLite consensus disorder prediction 345 394 - -
Lal20g0390 539 MobiDBLite consensus disorder prediction 473 539 - -
Lal20g0390 539 MobiDBLite consensus disorder prediction 238 253 - -
Lal20g0390 539 MobiDBLite consensus disorder prediction 224 304 - -
Lal20g0390 539 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 538 IPR019038 GO:0005634|GO:0006260|GO:0043625
Lal20g0390 539 MobiDBLite consensus disorder prediction 362 394 - -
Lal20g0390 539 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 6 137 IPR041913 -
Lal20g0390 539 MobiDBLite consensus disorder prediction 486 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0390 Lal-Chr20 3085959 3099702 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0390 K03504 - gmx:100812372 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0390 20 3085959 3099702 Lal20g0390 20 3085959 3099702 ECH
Lal20g0390 20 3085959 3099702 Lal11g1474 11 17999547 18006097 LSH