Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0356 ATGGACGCCGATGAACCTACACTGGTGGAACACATCACTCCCGTCTCTACAAAATCCAAACCCCGCAAGAGAAAGAATCACTTCATCCACCACGATGACAACGGCCACACGGCGGCGCGTGATAACCAAGCCAAACGAACACTCTATTCACTGACGAAACCTTCTTACGTTCTCGCACTCGGTCCTAATCATCTTAGATCGGAACACCGTGCGAGGTTGCATTTCATGTTGCGGAGACTCGTTAAACGACATCAATGGGTTGCGGCATGTGATGTTCTCAAAGCTTATATGAAGGGAACTGTTAATGATAGGTCTCCTTTGAGGAATCGTTTTAAGTATTCGGTTTTACTGCAGCTTCTTAAGCATGTGGAAAAAAAGGATCTTAATTCAACAAGAATCCAGAACCTCTATGACATTTGGTCTAAGAAGATTGGATCAATGAAGATTTGGCCAGTAGAGAGCAGATATGCAGTTAATTTGGAGAACATGTTATTCTGTCTCATGGAAGGTGATACTAATGATGCACATCAACTTGCTGTATGCCTTGAGCAAGAAAAAGTTGATATTGATCCTGTGTCAAAGATGATAATGGGCTTGACATTCTATGAGTTGTGGAGAGAAAAACAGTTTGACTTGCAAGAGAACTCACATATGGAGGGAATTTCCTTCAGCAATGAAGTTGGACAATCAGATTATCATAATACAGTTAAATCCCGCATTGCAGAGTCTCAAGATCAATGTGATTCAGAGGCCTCTGTCATGAATGGTAAGCAAATATCTAAGGATGTTGGCTTCAATGAAGATACGAGAGTTTCTATGGAGGTTGATGTTAACCATGAAAGAGAAAAACCACTTCACACTTTTCAGCAAGGTCTTTACTTGGACTCCGAAGAGCATAACGGAATTGAAGACCCTTTTTCTAATTATGGAGGTCTAACACAAGACACCTTATATGCTCTTGGTAGACTTGATTTGTGGTTGTTGCCCTTGCGTTTTTCGGATGAGAACAGTTTGGAGAAGCACAGAAATAATCCACATGAGTATTATATAAGTGCATTGAAATATTTAGAGCTTGCGCTCAGCTCATCAACCCCAGCATCAGCAGCATTACTTCCATTGACACAGCTGTTGCTGATTGAAGGTCAAGCTGAAGAGGCTCTAAATTTGCTTGATAGTCAATGTCGTAATTCAGCCTCTGTACTCCCAATTAGATTAAGGGCTGTTCTCGTGGAGCATTTTGATCGAAACAACTCTCTCTTGCTTGTTAGTTGTTTTGAAGATATATTAAAGAAGGATCCAACATGTAGTGATTCCTTATCAAGACTTGTCAAGATGCACCAAAACGGAGAATATAGTCTTCATTCTCTGCTGGAAATGATTGCTTCACATCTTGATGCTACATATGCAGAATACAATACATGGAAGGCTTTTTGCTTGTGTTTCTTTAAATTATCGCTCTGCGAAGAAGAATGCGTATCTGCATGCTCCATAAAAAATGGTGGAAACAGGCAACAACAAATCTCTAGCAAAACTCCCATAATATTTACACAGGGAAAGTCAGGAAAGTCTTGGAGACTTCGTTGTAGGTGGTGGCTGACAAGACATTTCAGCAATAGCATGCTTAATTCAGAGATTCAAAGTGGTGATCTGCAGCTACTAACATACAAAGCAGCATGTGCATCCTACATGTATGGACATGCCTTCAACTATGTTGTGAAGGCTTATTCTCATATTGAAAAAGAAAATGATAAGGATTTATTGTTGTTCTTGGATGAGCACAAATGCAATTCATTTGGGTTTTACCAAAAGAAGAAAGCTACATGTATGACATAA 1833 0.4004 MDADEPTLVEHITPVSTKSKPRKRKNHFIHHDDNGHTAARDNQAKRTLYSLTKPSYVLALGPNHLRSEHRARLHFMLRRLVKRHQWVAACDVLKAYMKGTVNDRSPLRNRFKYSVLLQLLKHVEKKDLNSTRIQNLYDIWSKKIGSMKIWPVESRYAVNLENMLFCLMEGDTNDAHQLAVCLEQEKVDIDPVSKMIMGLTFYELWREKQFDLQENSHMEGISFSNEVGQSDYHNTVKSRIAESQDQCDSEASVMNGKQISKDVGFNEDTRVSMEVDVNHEREKPLHTFQQGLYLDSEEHNGIEDPFSNYGGLTQDTLYALGRLDLWLLPLRFSDENSLEKHRNNPHEYYISALKYLELALSSSTPASAALLPLTQLLLIEGQAEEALNLLDSQCRNSASVLPIRLRAVLVEHFDRNNSLLLVSCFEDILKKDPTCSDSLSRLVKMHQNGEYSLHSLLEMIASHLDATYAEYNTWKAFCLCFFKLSLCEEECVSACSIKNGGNRQQQISSKTPIIFTQGKSGKSWRLRCRWWLTRHFSNSMLNSEIQSGDLQLLTYKAACASYMYGHAFNYVVKAYSHIEKENDKDLLLFLDEHKCNSFGFYQKKKATCMT 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0356 610 Pfam TAF RNA Polymerase I subunit A 80 576 IPR039495 GO:0000120|GO:0006360
Lal20g0356 610 PANTHER TAF RNA POLYMERASE I SUBUNIT A 16 605 - -
Lal20g0356 610 MobiDBLite consensus disorder prediction 16 37 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0356 - - gmx:100819662 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0356 20 2859531 2865950 Lal20g0356 20 2859531 2865950 ECH