Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0354 ATGGGTCGCCCACCGTGTAATGGAAGCCCTGCCTTTCGCTTCACACGTAGTGAGGTAGCAGAAATGGAAGCTATTTTGCATGCACACAACAACGCATTGCCAGCACATGATGTTCTGACAGCTCTTGCAGAGAAATTCAGTGAATCACCAGACCGCAAAGGCAAGATTGCAGTGCAGATGAAGCAAGTTTGGAACTGGTTTCAAAATAAGCGGTATGCAATAAGGGCAAAATCAAGTAAGACTCTTGGAAAGTTAGATATCTCACCTATGCCTAGGGATGCTTCGGCCCCAGTAAAAAATATGCCTCAACCAGCAGCTGCTCCAGTCTCATCTGCTTCAGATTCAACTAGAGGAAAAGCCACACAAGAAAATTCATCTATGGAATTTGAAGCTAAATCTGGAAGGGATAGAGCATGGTATGATGTTGCTAAGTTTCTATCCCACAGATATTTGGAGACCAGCAATCCGGAAGTGCTGGTGCGCTTTTCTGGTTTTGGACCTGCGGAAGATGAGTGGATTAATGTCCGGAAGAATGTCAGGCCACGCTCTATGCCGTGTGAATCATCAGAATGCATCGCTGTCATACCCGGAGATCTCGTACTCTGCTTTCAGGAAGGTAAAGAGCAGGCCCTTTACTTTGATGCCCATGTCCAGGATGCTCAAAGACGTAGGCATGATGTAAGAGGCTGTCGCTGTAGATTTTTAGTTCGCTATGATCATGATCAGTCAGAGGAAATTGTGCCTCTCAGGAAGATTTGTCGTAGGCCCGAAACTGACTATCGGCTACGTGAAGCTCATAATGCAAATGAGGCAGCACCTGTAGATCCTCAGAAGACTGGCATGGATCCAGCAACTGGTAATGCTGTCGACGTGGCTAGTACTTCTGCTGAACCACAAATGCAGCAGAATGCAAACACTCCCATCTTTGCATCAGTTTCACAAACAAATGTTTTTGCACCCGAACAAAGTATGGATATGATGCCAGAGATTGAAACGGTAACTGATGTTGCAGCAGGAAACTCCGTCGTCAACGCAGGCAATGCCGCTTTCACAAGCAATGTTCCTGTAGTCTCAAGTCAGAACATGGCTGAAGGAAATTAA 1101 0.4605 MGRPPCNGSPAFRFTRSEVAEMEAILHAHNNALPAHDVLTALAEKFSESPDRKGKIAVQMKQVWNWFQNKRYAIRAKSSKTLGKLDISPMPRDASAPVKNMPQPAAAPVSSASDSTRGKATQENSSMEFEAKSGRDRAWYDVAKFLSHRYLETSNPEVLVRFSGFGPAEDEWINVRKNVRPRSMPCESSECIAVIPGDLVLCFQEGKEQALYFDAHVQDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRPETDYRLREAHNANEAAPVDPQKTGMDPATGNAVDVASTSAEPQMQQNANTPIFASVSQTNVFAPEQSMDMMPEIETVTDVAAGNSVVNAGNAAFTSNVPVVSSQNMAEGN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0354 366 MobiDBLite consensus disorder prediction 106 128 - -
Lal20g0354 366 CDD homeodomain 13 75 IPR001356 GO:0003677
Lal20g0354 366 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 336 IPR039276 -
Lal20g0354 366 Gene3D - 186 258 - -
Lal20g0354 366 MobiDBLite consensus disorder prediction 84 128 - -
Lal20g0354 366 Gene3D - 9 83 - -
Lal20g0354 366 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Lal20g0354 366 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 336 - -
Lal20g0354 366 Gene3D - 124 185 - -
Lal20g0354 366 Pfam SAWADEE domain 126 253 IPR032001 GO:0003682
Lal20g0354 366 SMART HOX_1 7 81 IPR001356 GO:0003677
Lal20g0354 366 SUPERFAMILY Homeodomain-like 12 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0354 Lal-Chr20 2840132 2848658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0354 - - gmx:100783895 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0354 20 2840132 2848658 Lal20g0354 20 2840132 2848658 ECH