Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0348 ATGGCTTCAACTTCACGTGGTGGTGGCGGTGCTGCTGCTGGACGAATAAAAAACTTAGCTTCCTCTTTCAGTTCCGATTATCAGCCTCTCATTACTGATATTCGAAAGACTATGAGTTTTATGAAGGATATTGCGGTTGAATTGGAGAAAGACGGCCTCTCTGATAAGGTCAAGGAGTTGGAAGAGGCGGTTATTGAGTTAGCAGGCCTATCTGGACTAAGTGTGCATTTTTCCTCTGCAGTTCAAGCTTTTGCAAACAGATACCAGCCCGGAGAAGAGTTGACTGATTTTCATAAGGTTTTTGAAGACGAAGTTTCACAGTTTAAGGATAATCCAACTACAGATCCTAAAAGACACCCTTTTGTACGCCAATTTAAGGAAGCTGTATGGAAAGTCCATCACGAGGGACAGCCAATGCCAGGTGAGGAACAGGAGGACATTGTAATGACCAGCACCCAATCTAGTATTTTGAATATGACTTGTCCCCTGACTGGAAAGCCTGTTACCGAGCTTGAAGATCCAGTTCGCAGTATGGAATGTAAGCACATTTATGAAAAGAAAGTAATAATGACATATTTAAGGTCAAAGCAGCGGTCTCAATGCCCAGTGTCAGGTTGCCCAAAGATATTGGAGGCAGATAAGGTGGTGAATGATCCTTTGTTACTGATTGAGATTGATGAATTGCGCAAAATGACTAAAGAAACTAATATAGTACAAGACTTTACCATGCTTGATGAAGATGAGTGA 747 0.419 MASTSRGGGGAAAGRIKNLASSFSSDYQPLITDIRKTMSFMKDIAVELEKDGLSDKVKELEEAVIELAGLSGLSVHFSSAVQAFANRYQPGEELTDFHKVFEDEVSQFKDNPTTDPKRHPFVRQFKEAVWKVHHEGQPMPGEEQEDIVMTSTQSSILNMTCPLTGKPVTELEDPVRSMECKHIYEKKVIMTYLRSKQRSQCPVSGCPKILEADKVVNDPLLLIEIDELRKMTKETNIVQDFTMLDEDE 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0348 248 PANTHER UNCHARACTERIZED 12 235 IPR026846 GO:0000724|GO:0019789|GO:0030915
Lal20g0348 248 CDD SPL-RING_NSE2 159 227 IPR004181 GO:0008270
Lal20g0348 248 ProSiteProfiles Zinc finger SP-RING-type profile. 143 230 IPR004181 GO:0008270
Lal20g0348 248 Pfam Zinc-finger of the MIZ type in Nse subunit 146 206 IPR004181 GO:0008270
Lal20g0348 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 238 IPR013083 -
Lal20g0348 248 SUPERFAMILY RING/U-box 159 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0348 K22756 - gmx:100804379 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0348 20 2804863 2808609 Lal20g0348 20 2804863 2808609 ECH