Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0336 ATGGCTACTGCCTTCGTAACATCATGTTATCTAAAAAGAGCAGCTTTGACACTCTCTCATTCTCATCTTCTCCAAACCAATCACAACTTCTCTCTCCATCCCACTCTTTTCACTCATTCTTTCTCCTTTTCCACTTCTCCAGCTTTAGGTGCATGCCAAACTGTGCAAGCTTTGAAGGGAGAAGTTGATAAGTTACTTACAGGAGTAGGAGAAAAAAGTGTAACAAAAGAAGTGAAGCATGTTCTTGAGATGGCTAGACGAGCATCATTAAGACGAGAGGTTCTCCATACAGATTTTCTAACCCCTCCGGTGCTGAAGGAATCTATGCAAGTATTAGAAAAATTAGCAGATGTGAAAGCAATTGCACAAGGAGGTTATCCGCAGGCCGAACGTTGTCGGATTTCTGTTGGTCATCCAGAAGAACTGACAAGTGATCCAGATATTATTTCAGCATTGAGTATTACAGGGAACTTTCAGTTTGAACCTTGTTCTCATGGTGATTTCCTTGGCTCAATTCTTGGTACAGGAATCGTTAGGGAGAAACTTGGAGATATTATATTGAAGGGAGAACAGGGTGCTCAAATAATGGTTGTGCCAGAACTTGTTGAATTTCTAATGTCATCCCTAGATAAGGTTCGTAATGTTCCCGTATCTTGCACCAGGATACCATTAATTTCTCTTGATTATGAACCGCCAAGAATAACGAAATTTAAAACTGTAGAAGCTTCACTAAGAGTTGATGCAGTAGCTAGTGCAGGGTTTAAGGTTTCACGTTCGAAGCTAGTTGACATGATCAGGATTAAACCCCCCATCACCCGAGTATATGAGAGGAGGCGTCCACGTGGCAACAAGAGAACTGATGTGGCACTGTCCCATCAGCACAACACAGTCCCACGTGGCAGTGAGACTGATTCTACTGGAGATGAAGATGTCAACGGGGATGTGCGCATCAACTGGAACCCTGTTACCAGCAAAGGAACCACACTGAAGAGTGGAGATATTGTATCAGTCAGTGGAAAGGGAAGATTAAAGATAGGAGAAATAAACTCGACCAGGAAAGGAAAGTTTGCAGTTGAACTCATTCGGTATTTATAG 1095 0.4237 MATAFVTSCYLKRAALTLSHSHLLQTNHNFSLHPTLFTHSFSFSTSPALGACQTVQALKGEVDKLLTGVGEKSVTKEVKHVLEMARRASLRREVLHTDFLTPPVLKESMQVLEKLADVKAIAQGGYPQAERCRISVGHPEELTSDPDIISALSITGNFQFEPCSHGDFLGSILGTGIVREKLGDIILKGEQGAQIMVVPELVEFLMSSLDKVRNVPVSCTRIPLISLDYEPPRITKFKTVEASLRVDAVASAGFKVSRSKLVDMIRIKPPITRVYERRRPRGNKRTDVALSHQHNTVPRGSETDSTGDEDVNGDVRINWNPVTSKGTTLKSGDIVSVSGKGRLKIGEINSTRKGKFAVELIRYL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0336 364 ProSiteProfiles S4 RNA-binding domain profile. 312 349 - -
Lal20g0336 364 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 50 364 - -
Lal20g0336 364 Gene3D - 71 137 - -
Lal20g0336 364 Gene3D - 145 227 IPR012677 -
Lal20g0336 364 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 50 364 - -
Lal20g0336 364 CDD S4 312 344 - -
Lal20g0336 364 SUPERFAMILY Alpha-L RNA-binding motif 103 266 - -
Lal20g0336 364 TIGRFAM PS_II_S4: photosystem II S4 domain protein 74 266 IPR017506 -
Lal20g0336 364 Pfam Putative RNA-binding domain in YlmH 150 224 IPR040591 -
Lal20g0336 364 MobiDBLite consensus disorder prediction 293 317 - -
Lal20g0336 364 SUPERFAMILY Alpha-L RNA-binding motif 312 350 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0336 - - gmx:100793767 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0336 20 2711898 2726655 Lal20g0336 20 2711898 2726655 ECH