Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0332 ATGACGGGAGTGTCATTGGGTCTACGAACAGGGAGCAATGGGTCACTGCAGCAAATGCAAAACGGCAACGTTTTGAAGCTGCCGGCTTTGTCGCCGAGGCTTGTGCGTAGACCTTCAAGGGGGCCACTTTATAATCCAAGAGAGAAAGAAAGGGCCTACCCTTTTATTTGCAGGCACCTTGGAAGAGGGAGGGCTGCAATGTTGCTTATGATTGCCCTTGGCATTTCTGTTTTTGTATTTGGTTGCTTTACGCTTTACAAAGGTGCCAACATCCCCAATGAAATTGAAGATACACGATCTTACGCCATTACTAGGTATGAAATTTTAAAACCTGAAGGAGTAGAAGATAAGTCAAAGGATATTAGTTATGCTAGCAGGATCTCATCTACAAGTAGGAGTAAATGGACAGCAAGGCCTCCTCCAGCTCCTCATCCTCCAGCTTCATCTAAGTCTAAAGGTAGAAAAAAACATTTTCTTGCTTTGAGCCATCAATGCGACCATTTTGCATTTCCTCCTCCACCACCAGCTGGTAGAAGACGACTTGGACCTCGCCCATGCCCTGTGTGTTATATTCCTGTGGATCAAGCTATGGCTAGTATGCCAAGCTCCCCGTCAGAGTCTCCTTTGCTTCGCACTTTGACATATGTACATGATGAAAATCCAATTAAAAGTGAACCACATGGTGGCTCTGATTTTGGTGGATACCCTTCTCTAGAAGAAAGGGATGCTGCTTTTGATATAAAAGAAAGCATGACAATCCATTGTGGATTTGTCAAGGGAAGTAGACCTGGTCGCCAGACGGGGTTTGATTTTGATGAGGAAGATCTCTTAGAGTTGGACCAGTACCATGATGTCATTGTTGCATCTGCCATATTTGGAAACTATGATGTTATACAGCAGCCCAGGAACATCAGTTCAGAATCAAAGAAAAACATTCCTTTTTACATGTTCATTGATCAAGAAACAGAAACGTATATGAAAAATATGAGTATTTTGGGTAGCAGCAGGATAGTTGGATTGTGGAGAATATTTGTTGTTCGTAATGCTCCTTATGCTGATTCTCGGCGTAATGGAAAGATTCCAAAGCTTCTTCTGCACAGAATCTTCCCTAATGTCAGATATTCAATATGGATTGATGGGAAACTTGGGCTTGTTGTGGATCCATATCAAGTTCTTGAAAGGTTTTTATGGCGCACAAATGCTACTTTTGCAATTTCAAGGCACTACAGACGCTTTGATGTCTTTGTTGAGGCTGAGGCTAACAAAGCGGCCGGAAAATATGAAAATGCTTCCATCGATCACCAAATTCAATTTTATCAGAACCATGATGGTTTGACTCATTATTCCAAGGCTAAGCTTCCTATAACTAGTGATGTTCCTGAAGGTTGTGTTATCATAAGAGAGCACATTCCAATCACGAATCTGTTTACCTGCTTATGGTTCAATGAAGTTGATCGCTTTACTTCTAGGGATCAGTTAAGCTTTTCGACAGCAAGAGACAAAATAATGGCTAAAGTTGATTGGAGTATTAATATGTTTATGGATTGTGAAAGGCGTAACTTTGTGATACAGGCTTACCATAGAGACATATTGGAGCACATGCCGCCTCCTTCGCTTCCGGCTGTTGTAGTCCGTCATCCCAAGCTGCCTGTTCTTCCTCTTACTAATAGGCCTCAGTTGAAGAAGAATCCAAGGCGCGGGAAAGGAGATAGGAGATCAAGTTCGAAGCGTCGTCGTAAAGTAGGCATAAAGTTGGAAGCATTGTCATAA 1770 0.4232 MTGVSLGLRTGSNGSLQQMQNGNVLKLPALSPRLVRRPSRGPLYNPREKERAYPFICRHLGRGRAAMLLMIALGISVFVFGCFTLYKGANIPNEIEDTRSYAITRYEILKPEGVEDKSKDISYASRISSTSRSKWTARPPPAPHPPASSKSKGRKKHFLALSHQCDHFAFPPPPPAGRRRLGPRPCPVCYIPVDQAMASMPSSPSESPLLRTLTYVHDENPIKSEPHGGSDFGGYPSLEERDAAFDIKESMTIHCGFVKGSRPGRQTGFDFDEEDLLELDQYHDVIVASAIFGNYDVIQQPRNISSESKKNIPFYMFIDQETETYMKNMSILGSSRIVGLWRIFVVRNAPYADSRRNGKIPKLLLHRIFPNVRYSIWIDGKLGLVVDPYQVLERFLWRTNATFAISRHYRRFDVFVEAEANKAAGKYENASIDHQIQFYQNHDGLTHYSKAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTARDKIMAKVDWSINMFMDCERRNFVIQAYHRDILEHMPPPSLPAVVVRHPKLPVLPLTNRPQLKKNPRRGKGDRRSSSKRRRKVGIKLEALS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0332 589 MobiDBLite consensus disorder prediction 131 153 - -
Lal20g0332 589 MobiDBLite consensus disorder prediction 561 579 - -
Lal20g0332 589 Pfam Protein of unknown function (DUF616) 213 527 IPR006852 -
Lal20g0332 589 PANTHER DUF616 FAMILY PROTEIN 1 582 - -
Lal20g0332 589 PANTHER ALKALINE CERAMIDASE-RELATED 1 582 IPR006852 -
Lal20g0332 589 MobiDBLite consensus disorder prediction 553 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0332 Lal-Chr20 2676523 2682861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0332 - - gmx:100810918 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0332 20 2676523 2682861 Lal20g0332 20 2676523 2682861 ECH
Lal20g0332 20 2676523 2682861 Lal11g1428 11 17664996 17670921 LSH