Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0331 ATGTATGCACTGACGGCATCATTTATCATAAGAATTGAGTTAATGGGTGGCATTCAAGGTAGTCCTGCTTCTTCTGCTTTGACTGTGCAAGGCTATCAGGGAAACCAAGGTTCAGTAACTGCCACAACTAGTGGTGTGTCAAAGCCAAAGAAGAAAATTTGTTGTGCTTGCCCTGACACAAAGAGGCTGCGCGATGAATGCATAGTAGAGCATGGTGAAACTGCTTGTACAAAATGGATTGAGGCACACCGTCTATGCCTCCGCGCAGAGGGATTCAATGTCTGA 285 0.4561 MYALTASFIIRIELMGGIQGSPASSALTVQGYQGNQGSVTATTSGVSKPKKKICCACPDTKRLRDECIVEHGETACTKWIEAHRLCLRAEGFNV 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0331 94 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 19 94 - -
Lal20g0331 94 Pfam Cytochrome C oxidase copper chaperone (COX17) 50 94 IPR007745 GO:0005507|GO:0005758|GO:0016531
Lal20g0331 94 Gene3D CytochromE C oxidase copper chaperone 31 94 - -
Lal20g0331 94 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 54 94 - -
Lal20g0331 94 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 19 94 IPR007745 GO:0005507|GO:0005758|GO:0016531
Lal20g0331 94 SUPERFAMILY Cysteine alpha-hairpin motif 41 94 IPR009069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0331 Lal-Chr20 2666078 2668819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0331 K02260 - gmx:100526967 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0331 20 2666078 2668819 Lal20g0331 20 2666078 2668819 ECH