Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0327 ATGGAAGAATACAACCATGAATCGCCTAAGATGCCTGAAACCTTCGTCTACCAAACCCTCAGTCCCATCTCTCTCTCCGCCACCACTACCTCCCCTCAACCCAAACCAGAACCCGAACCAGAACCAGAACCAGAACCAGAACCATACTCCGTTTTCATCAACTCCCAACTTTCCGACCACCCCGAACCTCAATCATACACCGTTTTGCGCAATGAGATTTCTCTTGACACGCTCCAATGCGCTTCTTCTGATATTCCCGTCATCGATTTCTTCTCCCTCAATGTTGATGCTGAACCTACCGCCGGAGATTCACTCCCCGAGCTGAAGACGCCGATTTCGGTGACGGTTGAGCCAAAGACACCAGTTGTCGAGCCCGAGGCGAAGCTAGAGAGCGGTTGGTTTCGTGGGAATTGTAAATTCAGGAGCCCCATGCTTCAGCTCCATAAAGAGATTGTTGATTTTAGCGAATTTTTGTCGCCGACTCCAGAAGAGAAAGCTGCACGTGACACAGCAATTGAATCTGTATTTGGAGTTATAAGACACATATGGCCCCATTGCCAGGTCGAAGTATTTGGGTCTTTTAGGACAGGGCTGTATCTACCAACTAGTGATATCGATGTTGTGATTCTTCAAGCAGGCTTGCCAAATCCACAGATGGGCTTGAATGCACTTTCCAGAGCATTGTCACAAAGGGGCATTGCCAAGAAGATACAGGTCATTGGAAAGGCTCGTGTGCCAATTATTAAATTTATTGAAAAGAAAAGTGGTGTTTCATTTGATATAAGTTTTGACATAGACAATGGACCCAAAGCTGCTGAGTATATTCAGGAAGCGGTGGCTAAGTGGCCGCCACTACGACCATTGTGTTTGATTTTAAAAGTATTTTTGCAACAAAGAGAACTAAACGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTCCTTGCCATGCTGATGGCATTGTTACGGAATATCCGTGAGAGTCAAGTTTCTGCAGAGCACAACCTGGGGATCCTTTTGGTGCATTTTTTTGATGTCTATGGACGCAAATTGAACACCTCAGATGTGGGTGTGTCTTGTAATGGGGCAGGCACTTTTTTCTCAAAGAGCAGTAAAGGGTTTACTTCAAACAAGGGACGACCATATCTTATTGGCATTGAGGATCCACAGGCACCAGACAACGACATTGGGAAGAGCTCGTTTAATTATTTCCAGATTAGGTCGGCTTTTGCAATGGCTTTCACAACATTGACAAATTCCAAGATCATCCTTGGCTTAGGACCCAACAGAAGCATTCTCGGCACTATAATTAGACCAGACCCTGTCTTGGTGGAGCGTAAAGGGGGGTTGAATGGGGAGGTGACTTTTAGTAGCTTGCTCCCTGGTGCTGGCGAGCCATTAGAACAGCAGCACGGAGCACAAGATATCTTATGCAATTGGCACGTAGAAGACGAAGAAGAACCGCTACCACGGGGAATTGATGCTAGTTCGACACCTACCAAAAGCTCTTCATCAAAGAAGAGGAGGAAATCCGCATCTAAAGATAATTCCACCAAGAAGCTAAAGGAAAATGGAGGTAGTCGGAAAACTAGGGATGAAGAGAATGGCTCTAGAAAAGAGAACGGTGCAAGGAAGAAAAAGAAGAGAAGTGGTGACACTGATTATATTCATTACAGACAAGACCAGTAG 1689 0.4559 MEEYNHESPKMPETFVYQTLSPISLSATTTSPQPKPEPEPEPEPEPEPYSVFINSQLSDHPEPQSYTVLRNEISLDTLQCASSDIPVIDFFSLNVDAEPTAGDSLPELKTPISVTVEPKTPVVEPEAKLESGWFRGNCKFRSPMLQLHKEIVDFSEFLSPTPEEKAARDTAIESVFGVIRHIWPHCQVEVFGSFRTGLYLPTSDIDVVILQAGLPNPQMGLNALSRALSQRGIAKKIQVIGKARVPIIKFIEKKSGVSFDISFDIDNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLMALLRNIRESQVSAEHNLGILLVHFFDVYGRKLNTSDVGVSCNGAGTFFSKSSKGFTSNKGRPYLIGIEDPQAPDNDIGKSSFNYFQIRSAFAMAFTTLTNSKIILGLGPNRSILGTIIRPDPVLVERKGGLNGEVTFSSLLPGAGEPLEQQHGAQDILCNWHVEDEEEPLPRGIDASSTPTKSSSSKKRRKSASKDNSTKKLKENGGSRKTRDEENGSRKENGARKKKKRSGDTDYIHYRQDQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0327 562 PANTHER POLY(A) RNA POLYMERASE 132 552 IPR045862 GO:0004652|GO:0031499|GO:0043631
Lal20g0327 562 Gene3D - 144 419 - -
Lal20g0327 562 Pfam Nucleotidyltransferase domain 179 274 IPR002934 GO:0016779
Lal20g0327 562 CDD NT_PAP_TUTase 167 277 - -
Lal20g0327 562 Gene3D Beta Polymerase, domain 2 160 268 IPR043519 -
Lal20g0327 562 Pfam Cid1 family poly A polymerase 335 394 IPR002058 -
Lal20g0327 562 MobiDBLite consensus disorder prediction 1 63 - -
Lal20g0327 562 MobiDBLite consensus disorder prediction 487 562 - -
Lal20g0327 562 MobiDBLite consensus disorder prediction 516 562 - -
Lal20g0327 562 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 132 552 - -
Lal20g0327 562 SUPERFAMILY Nucleotidyltransferase 142 295 IPR043519 -
Lal20g0327 562 SUPERFAMILY PAP/OAS1 substrate-binding domain 283 421 - -
Lal20g0327 562 MobiDBLite consensus disorder prediction 12 32 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0327 K03514 - gmx:100811320 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0327 20 2641391 2648195 Lal20g0327 20 2641391 2648195 ECH