Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0326 ATGGCTACTATGCAATTCGAATCCCTCTCCCTTTCTCGCTCCTACTCTCTCTCTCCTCTTTCCTTCTCTCCTCCGATCACCGCTTCCTCCTTCACTCCTATCCCCGATCGCCGGAGCTCCGGCAAATTGCCACAATTCACCGGCCTCAAACTCCGGCCCGCCGCCGCCACTCGATTTTCCGGCTCCAGGATCGCTCCCCGTAGTGCACGCGTTGTTTGTGAGGCACAAGATACCGCTGTTGAGGGGCTAGTTTCCAGTCTGTCAATACAACTTGCTATCAAAGAATTTAGTCCTAAAAGGACCATAGTGGCTGGTATTACTGATGCAAATTGGCAATCACTTGTCCTTGAATCTGAAACTCCAGTTTTAGTTGAATTCTGGGCTCCATGGTGCGGTCCCTGCCGAATGATCCACCCAATTATCGACGAGCTAGCAAAGGACTATGCTGGGAAGCTGAAGTGTTACAAACTCAATACCGACGAGAGTCCTTCAACGGCTAGTCGATATGGGATTCGAAGCATCCCAACTGTCATTATCTTCAAGAATGGTGAGAAGAAAGATGCAGTTATTGGTGCTGTGCCCAAGACAACATTGACCACAAGCATAGAGAAATTCTTGTGA 621 0.4928 MATMQFESLSLSRSYSLSPLSFSPPITASSFTPIPDRRSSGKLPQFTGLKLRPAAATRFSGSRIAPRSARVVCEAQDTAVEGLVSSLSIQLAIKEFSPKRTIVAGITDANWQSLVLESETPVLVEFWAPWCGPCRMIHPIIDELAKDYAGKLKCYKLNTDESPSTASRYGIRSIPTVIIFKNGEKKDAVIGAVPKTTLTTSIEKFL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0326 206 Pfam Thioredoxin 105 203 IPR013766 -
Lal20g0326 206 Gene3D Glutaredoxin 102 206 - -
Lal20g0326 206 CDD TRX_family 109 203 - -
Lal20g0326 206 PRINTS Thioredoxin family signature 122 130 - -
Lal20g0326 206 PRINTS Thioredoxin family signature 130 139 - -
Lal20g0326 206 PRINTS Thioredoxin family signature 170 181 - -
Lal20g0326 206 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 206 - -
Lal20g0326 206 ProSiteProfiles Thioredoxin domain profile. 87 206 IPR013766 -
Lal20g0326 206 SUPERFAMILY Thioredoxin-like 106 206 IPR036249 -
Lal20g0326 206 PANTHER GEO12009P1 1 206 - -
Lal20g0326 206 TIGRFAM thioredoxin: thioredoxin 107 205 IPR005746 GO:0015035
Lal20g0326 206 ProSitePatterns Thioredoxin family active site. 123 141 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0326 Lal-Chr20 2633740 2636801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0326 K03671 - gmx:100811845 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0326 20 2633740 2636801 Lal20g0326 20 2633740 2636801 ECH
Lal20g0326 20 2633740 2636801 Lal1g1608 1 18453508 18454882 LSH