Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0324 ATGAGGGTTCCTTTGGCTGCAGTCATAGGAAGGTACCCATCAAGTGATGGAACTACCCAAATGGGTGGAATCATAAGGCATAATAGAAAATGCAGAGACATTGCTGTTTTAGTCTTTTTTATAGGTTTCTGGGTTGCAATGATTGTTAATTCCAGCTTTGGTTTCAATCAAGGAAACCCATCAAGGCTAACCTATGGGCTGGACTACAAAGGAAATGTGTGTGGGGACAAGCATGCGGGCCTTCGTGAATTGGAGCTGAAGTACTGGCTTAATCCTAATCAGATTCATCAAAGTGGATTGAAGGATAGCCAGTTCAAACTGGCCAATGCACGAAGTATATGCTTGTTGGACTGCCCTATACCTTCTGAAGATTCTCTTAATTGGGTGTGTGATTATCCTGATGGGGATATTCATCTTTCAACGGATGATTGGATCGATAGAAACTATGATTATTTTGAGTTCCTTACACCTGAAATGAGAAACTCCACTCTTCAACTTCAGGGACCTTGTTACCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAACTCATCCCTCGAGCATCAAATGTGTCTTTAAAGCATTGGCAGCAGATGGGTGGAGTTAGCATCAATGAAAACATTGTTATCGATAAGTCCATTCACAAGTATATCAATTCTCGTTACGCTGTCTTAAAGAGATACATGGCTGACATAGGAAAGGCATGGCCTGTGCTAATTGTTTGTGGAGGAATTTTACCTCTTTTTCTGTCGGTGATTTGGCTGCTAATGATTCGACATTTTGTTTCTGCAATGCCTTGGATAACGGTGGTTTTATTTAATATTCTAATAGTATCAGTCACAATGTTCTGCTACCTAAAAGTTGGATGGATAGGAAATGATGCTATTTCCCCCATTATTGGTGAGCATGACCCTTACATTCATGTAGTTGGGAGGGAGCTGACTCATCTGCGTGCTGCCACTGTACTAATGACCTTTATCATGGTTGTTTCCATTCTTACATCAATCGCTATTGTTCGTCGCATCCTTATGGCAACATCTGTCCTTAAGGCAAGCAGCACTTTATTATCTGCAGTTGCAGCAAAAGTGATCGGAGAAGTTCAAGCACTTATTATTTTCCCAATCATACCATATGCTATCCTTGCGGTGTTCTACATGTTTTGGATTTCTGCTGCTCTGCATTTGTTCAGCTCTGGCCGGGTTGTTCAGAATAACTGCAACTCTAACTGTTGTGCATATGATCTCCTGGAAAAAAAGGTAAACTGTGATCGGTGTTGTGGATATATCATTCGTTACACACCGCATATTGGAGTTTCCATCCTTTTTCATCTACTTGGCTGTTATTGGGCTACACAATTTTTCATAGCATGCTCATCAACCGTGATTGCTGGATCTGTTGCGTCTTATTATTGGGCCCGTGGTGAAACATCCCCAGAAATTCCTTTTCGTTCGGTCGTTTCCTCCATGAAGAGGCTTATGCGTTACAGCCTTGGTTCTGTGGCTCTTGGATCTCTGACTGTTTCATTTGTAGAGTCAATCCGCTTTCTGCTTGAATCTATTCGGCGCAAACTAAAAGTCTCTACTCACGTACCTGACAGCTGGATTGGCAAGGCAGCATACCAATCTTCTCATTGTTTTCAAAGGTGTATTGAGTGGACCATCAAATCAGTGAATCGCAATGCTTACATCATGATAGCCATAACGGGTAAAAGTTTCTTTAGAGCATCCGCAATTGCAACAGAATTAATCATGAATAACATCCTACGGATTGGGCGTGTCAATGTGATTGGGGATGTTATTTTGTTCCTCGGGAAACTGTGTGTCAGCCTCTCAAGTGCTGTTAATGCATTCCTCATGTTGGACTCGCACAAATATAAATCTGCGCATAACAAGATTTCATCTCCGCTCTTGCCTGTTACGATTTGCTGGACACTTGGGTATATTGTTGCAACTCTTTTCTTTGGAGTTGTAGAGATGTCAATTGACACAATCATTCTCTCATTCTGCCAAGATTCTGAAGAGCATGGGACAGCACAGTATGCTCCACCCCTTCTCATTGAAACTCTCAGTGACAACAATGAGATGCAGAGACTTACACAAGGACCCCAATGA 2118 0.4183 MRVPLAAVIGRYPSSDGTTQMGGIIRHNRKCRDIAVLVFFIGFWVAMIVNSSFGFNQGNPSRLTYGLDYKGNVCGDKHAGLRELELKYWLNPNQIHQSGLKDSQFKLANARSICLLDCPIPSEDSLNWVCDYPDGDIHLSTDDWIDRNYDYFEFLTPEMRNSTLQLQGPCYPVIFPSVNVYWSCQLIPRASNVSLKHWQQMGGVSINENIVIDKSIHKYINSRYAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLLMIRHFVSAMPWITVVLFNILIVSVTMFCYLKVGWIGNDAISPIIGEHDPYIHVVGRELTHLRAATVLMTFIMVVSILTSIAIVRRILMATSVLKASSTLLSAVAAKVIGEVQALIIFPIIPYAILAVFYMFWISAALHLFSSGRVVQNNCNSNCCAYDLLEKKVNCDRCCGYIIRYTPHIGVSILFHLLGCYWATQFFIACSSTVIAGSVASYYWARGETSPEIPFRSVVSSMKRLMRYSLGSVALGSLTVSFVESIRFLLESIRRKLKVSTHVPDSWIGKAAYQSSHCFQRCIEWTIKSVNRNAYIMIAITGKSFFRASAIATELIMNNILRIGRVNVIGDVILFLGKLCVSLSSAVNAFLMLDSHKYKSAHNKISSPLLPVTICWTLGYIVATLFFGVVEMSIDTIILSFCQDSEEHGTAQYAPPLLIETLSDNNEMQRLTQGPQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0324 705 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 702 IPR007603 GO:0022857|GO:0055085
Lal20g0324 705 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 702 - -
Lal20g0324 705 Pfam Plasma-membrane choline transporter 325 675 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0324 Lal-Chr20 2621589 2628635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0324 K15377 - gmx:100779959 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0324 20 2621589 2628635 Lal20g0324 20 2621589 2628635 ECH