Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0318 ATGGCAGTGAGCTTTCTGGGTCGTAGTAAGGTATCTGACCTATGCCTTGGGAAACCACCGTTGAGATCACTGTCTGAGTCAGCCACCGTGGCCGAGGCCTTGGTCGCACTAAAAAGCTCCGACGACAACTTCATAAGTGTGTGGAACAAGGAGGGTGGTGGTTGTGTTGGGAAAGTGTGCATGGTTGATATTGCTTGTTACCTTTGCAAAGAGGAGAGTGTCTTGTCTCCTTCTTCTGCTCTTAAGGCACCTATCTCTCATGTTTTGTCTAAGGTTCCTGGCCTTGTCATGCATTTAGAACCACATTCTAGCTTATTGGAAGCTATTAATCTGATTCTCCAAGGAGCACAAAATCTTGTAGTACCAATAATACCAACTAAAAAAAGTGGCATTTCAAGAAGAAAACAACATCTTCAGAAATCATCAACAATGAACATCCACAATGGCTGTGAATTCTGCTGGTTAACACAAGAGGATGTGATCCGGTTCCTTCTCGGTTCAATAGGCCTCTTCACACCACTCCCTGCTCTTTCCATTGACACACTTGGCATTATAAACTCGAATGTGCTAGCCATTGATTACTACTCCCCTGCATCCTCTGCATTGAGTGCTATCTCAAGGTCCCTTACTCAACAAACTTCGGTCGCGATCGTTGACAACGATGGGACTTTTATTGGTGAGATATCACCCTTCAACCTTGCTTGTTGCGATGAGACTATCGCGGCCGCGATTGCAACTTTATCGGCCGGTGACTTGATGGCCTACATTGACTGTGGTGGCCCTCCAGAGGATCTTATAAGAGTGGTCAAGGCAAGATTGAAGGAGAAGAATTTGGAGAAAATGTTACAAGAGTTTACAATTTCTTTCCCTTTCAGTTGTGACACATTGATATCCTCTTCGTCTTCATCGGACGAGGAATCGTCGATAAGGACACGGATGAGGCCGGGAAGGCAGAAAAGGTCATACAGCTATTCGAGTAGGATGGTAAGGAAGGCTGAGGCTGTAGTGTGTCATCACAAGAGCTCACTTGTTGCTGTGATGATTCAAGCAATTGCTCATAGGGTGAACTACTTGTGGGTTATTGAGGATGATTGTAGCTTAATTGGCATTGTTACATTTTCTAGTATCTTGAAAGTGTTCACAGAATATTTAGAGACAATTTAG 1164 0.4424 MAVSFLGRSKVSDLCLGKPPLRSLSESATVAEALVALKSSDDNFISVWNKEGGGCVGKVCMVDIACYLCKEESVLSPSSALKAPISHVLSKVPGLVMHLEPHSSLLEAINLILQGAQNLVVPIIPTKKSGISRRKQHLQKSSTMNIHNGCEFCWLTQEDVIRFLLGSIGLFTPLPALSIDTLGIINSNVLAIDYYSPASSALSAISRSLTQQTSVAIVDNDGTFIGEISPFNLACCDETIAAAIATLSAGDLMAYIDCGGPPEDLIRVVKARLKEKNLEKMLQEFTISFPFSCDTLISSSSSSDEESSIRTRMRPGRQKRSYSYSSRMVRKAEAVVCHHKSSLVAVMIQAIAHRVNYLWVIEDDCSLIGIVTFSSILKVFTEYLETI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0318 387 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 9 386 - -
Lal20g0318 387 MobiDBLite consensus disorder prediction 298 321 - -
Lal20g0318 387 Pfam CBS domain 334 379 IPR000644 -
Lal20g0318 387 SUPERFAMILY CBS-domain pair 4 119 IPR046342 -
Lal20g0318 387 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN-RELATED 9 386 - -
Lal20g0318 387 Gene3D - 296 382 IPR046342 -
Lal20g0318 387 SUPERFAMILY CBS-domain pair 174 383 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0318 Lal-Chr20 2540079 2542198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0318 - - gmx:100787229 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0318 20 2540079 2542198 Lal20g0318 20 2540079 2542198 ECH