Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0315 ATGGATCCAACCACTCGTCTTGATCATGCACTTTTTCAGCTTACTCCAACCAGAACCAGGTGTGATCTTATTATAGCTGGTGGGGGTGTGAATGAAAGACTAGCTACTGGGCTTTTAGAACCGTTTCTTTGTCACCTTAAGAGTGCAAAAGATCAGATTTCTAAAGGTGGATATTCAATCACTCTACATCCAGCTTCTGCACATCCTCACTGGTTCACCAAAGCCACCCTTCAAAGGTTTGTTAGATTTGTAAGCACTCCAGAAGTTCTAGAGAGGTTTGTGACAATAGAGAAGGAGATTGTGCAAATTGAAAGTTCTATTCAGCCAAGTGAGAAGAGCAAGTTAGAGGCAGAGGGAGAAGGACATGTGTCATATGCAGATGGACGTGTCTTAAGGTCAACTACCTCCTCCAAGCTTAGAGATGAACTAGGTGGAACCAATCAAGATGGATGTGAAGAAAATTCGAGAGTTCGTCTTCAACGTGTTCTGGATAATCGTAAATCCATGCTTTGCAAAGAGCAAGCGATGGCCTATGCTCGTGCTTTAGTTGCAGGATTTCACCCGGAATCTGTGGATGATCTTATATATTTTGCTGATGCTTTTGGAGCTTCACGTTTAAGGGAAGCATGCATCAATTTCTTAGACCTGTGCAAACAAAAGAATGAAGACAAGCTCTGGATGGATGAGATAGCGGCAATGCAAGCATCGGCTCAACCCGTATTGCCATATTTGAGGACATGTGGAATCATCCTAGCTGGTGAAGATGATAACAATAGTAAACTAAATAGCCTAGTTGATGCCTCAATCTCTGACTCAACTGCTAGTCTTGGAAGTTTGGACATTAGCCAAGATAATAGCTTTCCCACATCAGTTCAAACAACATCAACAGATGGAAGGGCTCAAATACCAACGTCCTGGCCAAACCATCTTCCTCAGTACATGCACAATTTTCAGGGTCCTGCATTTCAGAAAATGCCTCCATATCAAGGGTACCTCTATCCTGGTATGCAGGTTCCCTCTTCATATTATCCAGGGAATATGCAATGGCCTCCTAATGTGGAAGACTCGCATAATTTTCTTGACCGAGACTCAGATTATCATAAATCATCCCTTAAGAAGAAGAACAAGAAGAAACATCGTCAAGTGTTGGAGCACTCTGAAGAAGATGCATCAACCGAATCCAGTGACTCTAGTTATGTGACTAATTCAGATGACCAATCAAGGCAAGGCAAAAAGCATTCTTCATCGCAGCACAAAAAGAAGCACAGAAAGAAGTCCTCGAGGAAAGTAGTTATTCGTAATATAAACTATATAACCTCTAATGGAGATGGTGAGAAGGGTAGCGTCACGGAAGGGAGTTTGTCCAATGAAGAAGAATTTATCAATGGTCGCCATAAGACACAACATAGCGCAAAGCATGCTGACAAGCTAAATGGTTCTGCCGATGTTGATTCCGATGCCATAAAAGGCAATGACAACTGGGATGCTTTCCAAAATCTTCTTTTGAGAGATGATGAGCATACTCTTGATGCAGAAAAAGAGCATATACAATTTCAGGAGGAATATAATGTGAATAAGAATTTTGAAGATGGAAGGTCAAATGAATTTAACCACAAACCATATATTACTAAAATTCGAGCAACTTCAAATGACTCCTTTGTTATGACAGAGAGGGAATTGGGCAGTGAGGGTCAAAACCACATTGAATACTTTAATGAATGGAAGCAAACACCTTCATCGATGAAGAAAAAAGATAGCACATACGAGTTGTTTTCTCAGAGAAATGAAGAATCGGGTTCGGGTGCCTATTCTGTGTCAACTCTGTCAGGCTGTGGCCCAGAATCATCTCTTGCTAAAAGTCAGAAAGAGGAGGATTGGTTCATTGTCAATCATTCCAGTAAACCAGAAAATGAGGATCAGAACAAAAATTTCAGTATAATTGATGATGTTTCCATTTTGCCATCAGCTACTAATGGTGTTCATGTAGAGGAAAACAAGAAAAACATTTTGGTTGATGACTCTTTTATGATTCAAGCTCGATCATCAGAAAATCAATATAATTGTCAATCGTCTGCAGGCATACGTTCAGTCTCTGACATTGTTGGTGTTAATGAATTTGCAAATATCACACAAGAAGGTTCACATACTAAGACTGATACCTTGAAGTCCCATGAGCCAGATGATCTCTACATGGTTCTTGACCGTGATTCAGCCGTAGAGCAGAATGCTGCAGCGTGGAGTGTGGAAATGGATTTTGAAAATAACATTTCGCTAAATGAAGCAAATGGAAAGCTTTGTGATGTTAAAACCGACAAAAAGCAGCAGCCTAATGGTGAGAAGGCTGATACTAAAACTCCAGGAGTGCGAAACGGAAAAGTTTCAAGTAAAGAGGCAAAGTCTAAGGCTCTAAATGCATCTCTTGGGAAGAACAAATCTGATATCAGTTCAAGAAGCAAAGCATCCCCAGGAAACCGAAGTACACATATGAAGAACAAATCTGAGAAAGAAGAAGAAAGTAGAAGGAGAAGAGAGGAACTACTATCTCAGAGGCACAAAAGAATTGCTGAAAGAAGTGCCTCTAAGAAAACTGAAAAAGAAACCAAGACTTCCTTGAATTCTGAAAAGAAAGAGAAGACTAAGATTTATCCATCCAGTGAGGAGACTAAGGAATTGCACAAACCAGTTCTTAGGAAATCCACCATCGAACGCCTTGCAACTGCCCGAGTAACTCAGAAAGTTTCACCAAGTCGAGCAAAATCAGGTCCAACAAAGAAACCATCCTTGCAGCCAAATGGGGTATCATTGCAGAAGATTGGTGCCACAGTAAAGAGGAAACAGGTCACAAAAGAAGCAAAATCTTCGAATAAAAAAGAAGACTCGAAGAAAACAGATGTAGAAATTCTTCATGACACTAATGTCAAGACTCGGAATGAAATGGAAGGCTCTGTACTATTGCTCGTGAACTCCGGTGATGTACAACCTGTTGAAACAAATAAGGATAGTTTTGGTTTGAAAAACAATGGAGAGCTATCCAAGACATTACCTGAGAAAAATGCAAGAGATTTCATTTCAGAAGGAGAACATGCGCTTGAAAATGTTGGCCAAATTCGCGTGGATTCGTCTTTGCCAAATCACTATCAAGCCTCAAGAGGTGAAGAAGTATTGAACAAGTTATCTTTACTTCCTGGTGATAACAAGCCTCAACATACTACTGATGTGATCACAAATCCAATGGTATCACCTAGCAAGCCGCTAACCGTTTCTGCCGTGAATTCAAAGGTTAATCATGAAATAGAAGAAAGCAATGATGTCTCTACTATAGTCCCTGAGAAAAAAAGTTATTTTTCTACCCCTCCACCCAGTGATCAAATGATGCCAGAACCCATCTACTCCAGGAAGAAATGGAACAGTGATGAGGACTCTTCAAAAGCAGCGAAAGGGTTTCGGAAGCTTCTCTTCTTTGGAAGAAAGAGCTGA 3477 0.4052 MDPTTRLDHALFQLTPTRTRCDLIIAGGGVNERLATGLLEPFLCHLKSAKDQISKGGYSITLHPASAHPHWFTKATLQRFVRFVSTPEVLERFVTIEKEIVQIESSIQPSEKSKLEAEGEGHVSYADGRVLRSTTSSKLRDELGGTNQDGCEENSRVRLQRVLDNRKSMLCKEQAMAYARALVAGFHPESVDDLIYFADAFGASRLREACINFLDLCKQKNEDKLWMDEIAAMQASAQPVLPYLRTCGIILAGEDDNNSKLNSLVDASISDSTASLGSLDISQDNSFPTSVQTTSTDGRAQIPTSWPNHLPQYMHNFQGPAFQKMPPYQGYLYPGMQVPSSYYPGNMQWPPNVEDSHNFLDRDSDYHKSSLKKKNKKKHRQVLEHSEEDASTESSDSSYVTNSDDQSRQGKKHSSSQHKKKHRKKSSRKVVIRNINYITSNGDGEKGSVTEGSLSNEEEFINGRHKTQHSAKHADKLNGSADVDSDAIKGNDNWDAFQNLLLRDDEHTLDAEKEHIQFQEEYNVNKNFEDGRSNEFNHKPYITKIRATSNDSFVMTERELGSEGQNHIEYFNEWKQTPSSMKKKDSTYELFSQRNEESGSGAYSVSTLSGCGPESSLAKSQKEEDWFIVNHSSKPENEDQNKNFSIIDDVSILPSATNGVHVEENKKNILVDDSFMIQARSSENQYNCQSSAGIRSVSDIVGVNEFANITQEGSHTKTDTLKSHEPDDLYMVLDRDSAVEQNAAAWSVEMDFENNISLNEANGKLCDVKTDKKQQPNGEKADTKTPGVRNGKVSSKEAKSKALNASLGKNKSDISSRSKASPGNRSTHMKNKSEKEEESRRRREELLSQRHKRIAERSASKKTEKETKTSLNSEKKEKTKIYPSSEETKELHKPVLRKSTIERLATARVTQKVSPSRAKSGPTKKPSLQPNGVSLQKIGATVKRKQVTKEAKSSNKKEDSKKTDVEILHDTNVKTRNEMEGSVLLLVNSGDVQPVETNKDSFGLKNNGELSKTLPEKNARDFISEGEHALENVGQIRVDSSLPNHYQASRGEEVLNKLSLLPGDNKPQHTTDVITNPMVSPSKPLTVSAVNSKVNHEIEESNDVSTIVPEKKSYFSTPPPSDQMMPEPIYSRKKWNSDEDSSKAAKGFRKLLFFGRKS 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0315 1158 Coils Coil 829 849 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 356 370 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 943 964 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 904 936 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 354 431 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 797 827 - -
Lal20g0315 1158 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 1158 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 767 964 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 828 899 - -
Lal20g0315 1158 MobiDBLite consensus disorder prediction 413 430 - -
Lal20g0315 1158 PANTHER COP1-INTERACTING PROTEIN 7 1 1158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0315 Lal-Chr20 2490925 2497639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0315 - - gmx:100815598 1508.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0315 20 2490925 2497639 Lal20g0315 20 2490925 2497639 ECH