Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0310 ATGTTCTCAACATATGCAACCAACGAGAATCATGAAGATGATGATTTTATCTCTGTGACTCTCACTTCTTTCTTCTTCAACCATAACCATACAATTCCATTTGGATCTTATAACCTTAATCTCCATTCATCAAAGTTCAATCCTCAACAATCAAGAAAACAAAAAAAGAAAATGGGGAAATCAACAACCACAAGGAATAGTAGAGAGTGGACTCAGATCTACGCGATTTATGGAATGGATCAATGGCAAACCCTAATTTTCCTCTTAGCCCAAGCGATTCTCTTTTCAGTGTTTTCAATTCTTTACCTTCTTTACTTCACCTCAATATGCATCTTCTTCGAGCTCATTCTCCCCTCCGGCGCCGCCAGATTCGCCGCAGGATTTACCGGTGTCGTCACAGTTCTCTCCGCCGTGTGCCTATACTTCGCCGCCGCGAACTTCTTCTACTCCGCCGTCCCACTCCAATACGACATGGCCAACCGCATCGTCTCCGCCGTCTCCGACTGGTCCTCCGTGAAGCTCGCACTCGACCTCGGCTGCTGCGGCCGCGGAATCCTCCTCACCGCCGTCGCGATGCAGCTGAAAAAAGAAGGCTCTTCAGGCCGGGTGGTAGGGTTGGAGCGGTGGAAGCAAACCACCCTCTCAACGCTCAGAACCGCCGTGACGGAAGGCGTCGGAGAATACGTCACGTGCAGGGATGGAGACGCGAGGAGGCTTCCGTTCCGGGATAATTACTTCGACGTGGTGGTTTCGGGTGTTTTCGTGCACACAGTCGGGGTTGGACGGCGGAGCGCGGCGGAGGCGGCGGCGGAGAGGATGAGGGCGGTGGGGGAAGTAGTTAGGGTAATGAAACCTGGTGGAGTAGGTGTTGTGTGGGACCTACTGCACGTGCCAGAATATGTGACGAGATTGAAAGAATTGAATATGGAAGATGTTAGAGTTTCAGAATGTGTTACTGCTTTCATGGTTAGTAGCCATATCGTTTCTTTCAGGAAACCTACTCAACAATATCTTCTGGCCCCACCTGAAGTTACATTAGATTGGAGATTATGCTGA 1056 0.4981 MFSTYATNENHEDDDFISVTLTSFFFNHNHTIPFGSYNLNLHSSKFNPQQSRKQKKKMGKSTTTRNSREWTQIYAIYGMDQWQTLIFLLAQAILFSVFSILYLLYFTSICIFFELILPSGAARFAAGFTGVVTVLSAVCLYFAAANFFYSAVPLQYDMANRIVSAVSDWSSVKLALDLGCCGRGILLTAVAMQLKKEGSSGRVVGLERWKQTTLSTLRTAVTEGVGEYVTCRDGDARRLPFRDNYFDVVVSGVFVHTVGVGRRSAAEAAAERMRAVGEVVRVMKPGGVGVVWDLLHVPEYVTRLKELNMEDVRVSECVTAFMVSSHIVSFRKPTQQYLLAPPEVTLDWRLC 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0310 351 CDD AdoMet_MTases 176 295 - -
Lal20g0310 351 Pfam Methyltransferase domain 176 289 IPR013216 GO:0008168
Lal20g0310 351 PANTHER EXPRESSED PROTEIN 58 350 - -
Lal20g0310 351 Gene3D Vaccinia Virus protein VP39 141 339 IPR029063 -
Lal20g0310 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 316 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0310 Lal-Chr20 2421953 2423742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0310 - - gmx:100804520 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0310 20 2421953 2423742 Lal20g0310 20 2421953 2423742 ECH
Lal20g0310 20 2421953 2423742 Lal1g1650 1 18927234 18928115 LSH