Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0307 ATGGATGTCTCAATTAGCAAAGGTTTTATATGTGTTCTGCTGTTACTTGCATTATGTATGATGCATATAATTGCAGCAGCAGCAGCAGCAGATATACAGACGTGCACGAACCGCAAGAGCCAATGCTTCCTCAAGAAAATTCCATGCCCTTCTGAGTGCCCTTTGAAGTCACCATCTGATTCAAAAGCCAAAGTTTGCTATCTTGATTGTGATTCTCCCATATGTAAAACTCACTGCAAAACGCGAAAACCAAATTGCAATGGCCGTGGTTCTGCGTGTTTGGACCCTCGTTTTGTTGGCGCAGATGGCATTGTTTTCTACTTCCATGGAAGGCGAGACGAGCATTTCAGCTTAGTATCCGATGTCAACCTCCAAATCAATGCTCGATTTATTGGCCTAAGGACAGCAGGTAGGCCTAGAGATTATACTTGGATTCAAGCACTCGGAATCCTATTTGATTCTCACAACTTTTCCATTGAGGCCACTCCATCAGAAACTTGGGATGATGAAGTTGATCATTTGAAGCTCTCTTACAATGAAGAAGAAATCGTCGTCCCGAAAAGTGACCTCTCTACATGGCAATGCCAAGAAAATCAACTCAGGGTAGAGAGAACTTCTAGCAAGAACAGTGTTATGATTACTCTCCCAGAAGTTGCAGAGATATCTGTCAATGTGGTGCCAGTCACCAAGGAGGACAGTAAAATCCATAACTATCAGATACCTAATGATGATTGTTTTGCACACTTGGAAGTACAGTTCAGATTCTATGGTTTATCCTCCAAAGTTGAAGGTGTTCTTGGCAGGACTTACCAGTCCGATTTTCAGAATCCGGCGAAGCCAGGTGTTGCAATGCCGGTAGTTGGAGGGGAAGACAAGTATAGAACCACATCACTTATTTCTGCAGATTGTGGTTCTTGTATATTCTCTCCTGCTAAAGCTTCAGAGAAGGAAGAGTCAGTGATAGAATATGGTATGTTGGATTGTACTAGTGGTTCCAACAGTGGGAATGGTATAGTTTGCAGAAGATAA 1029 0.4257 MDVSISKGFICVLLLLALCMMHIIAAAAAADIQTCTNRKSQCFLKKIPCPSECPLKSPSDSKAKVCYLDCDSPICKTHCKTRKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRTAGRPRDYTWIQALGILFDSHNFSIEATPSETWDDEVDHLKLSYNEEEIVVPKSDLSTWQCQENQLRVERTSSKNSVMITLPEVAEISVNVVPVTKEDSKIHNYQIPNDDCFAHLEVQFRFYGLSSKVEGVLGRTYQSDFQNPAKPGVAMPVVGGEDKYRTTSLISADCGSCIFSPAKASEKEESVIEYGMLDCTSGSNSGNGIVCRR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0307 342 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 13 342 - -
Lal20g0307 342 Pfam Root cap 252 308 IPR009646 -
Lal20g0307 342 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 13 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0307 Lal-Chr20 2355187 2356342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0307 - - gmx:100808294 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0307 20 2355187 2356342 Lal20g0307 20 2355187 2356342 ECH