Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0301 ATGGGTTTTTTGAATATGAAAATAATTTTAATCTCAACTGGGTTTCTATCTATAGCAATGGGATTAAAGCTTTCTTTCCCAATTATCACTCATTTCATAATCTCTGAACTAGCTCCTTCAATTTCATCATTTTTCTACACTACCCTCACTCCTCCTTATCTCTATATACTTCTCAATTTCATTATCCTCACCATCCTCGCTTCCTCAAAATTTCACACCGAACCGGTTTTCTATGCAACAACGGTTCAACCCGAACCGGTCAAGACCGAACAAACAGATTATAATAACAACGTCTACAACGGCGTCGTTTCTGTTGCACCATTTTATAATCCAGAAACGACGCCGTTGTGCATCGATACGGTAATAAAAAATGTTAACGGTACTGAGTGTTATATTTATGACGTGGACTTACCAGCGAAAACGACGGTAAACAGCGTCGTTTCTGGTTCTGAGGCTTATCAACTAGAAACGACGCCGTTGAGCGATGATGCAGTGATGAATAGTAATGGTTGTGATGGTTACCTTTCGGATGTGCACGCGCCGGTGGAAGCGACGGTTACAAGCGGAAACGACGCCGTTGCCACTCCGTACTTGCAGAAAAAGGAGCCGTTTGCGTTTTCGAATGATAAGAATGAGAAACCTCCTCTTTCCGCTAGGTTCAGCCAAAGGAAAACCGTTAGAACCAGTCCAGAAGGAGGGAAGGTAATTGCGTTGGGAGTAGCAAAATCGAAGAAGCAAGATACGCTAGAGAGCACGTGGAAAACGATAACTGAGGGGAGAGGCATGCCGCTGACGAGGCACCTGAAGAAGTCGGAAACATGGGAGCAGCAGAGTCGCCGGAATGCTGCACCGTTAACTGATTTGAACGGCGGAGATAGCGGCGGAGGAAAGGCGGTGATGAAGAAATCTGAGACGTTTAGCGGAAGGGAGAATAAGAATAAGGTGTCGTCGTCGCCGGGTTCAGGTGGGAAGTTGAGGAAAGAATCGTCGCTGAGTCAGGACGAGTTGCACCGGCGAGTTGAAGCGTTTATAAAGAAATTCAACACGGAGATGAGATTGCAGAGGCAAGAATCGTTGAAACAGTACAGTAATAATAATATGATAAATAGTGGGGCCCAATGA 1122 0.4501 MGFLNMKIILISTGFLSIAMGLKLSFPIITHFIISELAPSISSFFYTTLTPPYLYILLNFIILTILASSKFHTEPVFYATTVQPEPVKTEQTDYNNNVYNGVVSVAPFYNPETTPLCIDTVIKNVNGTECYIYDVDLPAKTTVNSVVSGSEAYQLETTPLSDDAVMNSNGCDGYLSDVHAPVEATVTSGNDAVATPYLQKKEPFAFSNDKNEKPPLSARFSQRKTVRTSPEGGKVIALGVAKSKKQDTLESTWKTITEGRGMPLTRHLKKSETWEQQSRRNAAPLTDLNGGDSGGGKAVMKKSETFSGRENKNKVSSSPGSGGKLRKESSLSQDELHRRVEAFIKKFNTEMRLQRQESLKQYSNNNMINSGAQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0301 373 Pfam Cotton fibre expressed protein 333 363 IPR008480 -
Lal20g0301 373 MobiDBLite consensus disorder prediction 247 335 - -
Lal20g0301 373 PANTHER DUF761 DOMAIN PROTEIN 4 148 - -
Lal20g0301 373 PANTHER DUF761 DOMAIN PROTEIN 142 371 - -
Lal20g0301 373 MobiDBLite consensus disorder prediction 310 327 - -
Lal20g0301 373 Pfam Domain of unknown function (DUF4408) 39 71 IPR025520 -
Lal20g0301 373 MobiDBLite consensus disorder prediction 204 231 - -
Lal20g0301 373 PANTHER COTTON FIBER (DUF761) 142 371 - -
Lal20g0301 373 PANTHER COTTON FIBER (DUF761) 4 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0301 Lal-Chr20 2316016 2317603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0301 - - lang:109348174 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0301 20 2316016 2317603 Lal20g0301 20 2316016 2317603 ECH
Lal20g0301 20 2316016 2317603 Lal1g1654 1 18958275 18959847 LSH