Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0290 ATGACGCCGCATAACTACTTCACGGCGGCACTCACGGTGGCTTTTCTGAGTGCTTCGTTTGCGTACTATAACTATAGCATCAACCCACCCAACAAATCCGAGAAGGACGTTTTGCAGTACGAGGTTGTTCCAATCGAGAACGCGGTGGGACCGGAGAGTTTCGCTTTCGATTCCAACGGCGAAGGCCCTTACACCGGCGTATCTGACGGCCGAATCATTAAGTGGCATCCCCTCCAGAAACGGTGGTTCAACTTTGCCACCACTTATTCACACAGAAATGATCAATGTGGAGGACCATATAATAAGCACATCAAGACAGAACATATTTGTGGGCGCCCACTAGGATTGTGCTTCAGCAACATCACAAGTGATCTCTACATTGCTGATGCTTATAAAGGACTCATTATTGTTGGTCCCAATGGTGGCACTGCCACAACAGTTTCATCACATATACAAGGTTCTCCTTTTGGGTTTACAAATAGTGTGGATATTGATCAACAAACTGGAACAGTGTACTTCACCAGCAGCAGTTCCAAATATGAAAGGAGGAACTATGTCTCACTGATCCTAAGCAAAGATAAAACAGGGAGGCTAATGAAATATGATCCACAAAGCAAACAAGTTAGTCTTCTTCTAAACAATCTCTCATTTGCAAATGGGATAGCACTAAGCAAAGGCAATGACTATATTCTAATAGCAGAAACCAACAACTGTAGAATACTAAGGTATTGGCTAGAAACCTCAAAAGCTGGAACCTTGGAAGTCTTTGTTGATCTCCTAGGTTTCCCAGACAACATTAAACGTAGTCCAAGAGGGGGATTTTGGGTTGGAATTTATTCAAGAAGAGATAAACTTGTCCAATGGATTCTATCATATCCTTGGATTGGAAGAACTCTTCTGAAGCTTCCTTTAGATATTACAAAAGTTTATTCATATTTGGCTAAGCTGAAAGGGAGTAGTGGATTGGCAATTAGGCTAAGTGATGAGGGTGATGTTTTGGAAATTGTTGAAAGTGGAACAAAAGGTAGGTCTATTAGTGATGTTGAGGAAAGAGATGGGGTATTATGGGTTGGATCTATAGAGACACCTTTTGCAGGAAAGTATCATATTCTTGGAGCACAAGGGTAA 1128 0.4193 MTPHNYFTAALTVAFLSASFAYYNYSINPPNKSEKDVLQYEVVPIENAVGPESFAFDSNGEGPYTGVSDGRIIKWHPLQKRWFNFATTYSHRNDQCGGPYNKHIKTEHICGRPLGLCFSNITSDLYIADAYKGLIIVGPNGGTATTVSSHIQGSPFGFTNSVDIDQQTGTVYFTSSSSKYERRNYVSLILSKDKTGRLMKYDPQSKQVSLLLNNLSFANGIALSKGNDYILIAETNNCRILRYWLETSKAGTLEVFVDLLGFPDNIKRSPRGGFWVGIYSRRDKLVQWILSYPWIGRTLLKLPLDITKVYSYLAKLKGSSGLAIRLSDEGDVLEIVESGTKGRSISDVEERDGVLWVGSIETPFAGKYHILGAQG 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0290 375 PANTHER STRICTOSIDINE SYNTHASE-RELATED 9 366 - -
Lal20g0290 375 Pfam Strictosidine synthase-like, N-terminal 41 75 - -
Lal20g0290 375 Pfam Strictosidine synthase 160 246 IPR018119 GO:0009058|GO:0016844
Lal20g0290 375 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 9 366 - -
Lal20g0290 375 SUPERFAMILY Calcium-dependent phosphotriesterase 39 363 - -
Lal20g0290 375 Gene3D - 34 372 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0290 Lal-Chr20 2198499 2204006 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0290 - - gmx:100789150 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0290 20 2198499 2204006 Lal20g0290 20 2198499 2204006 ECH