Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0280 ATGGCTATTTTCTTATCCACAATTCTAGTTCCTTCTCTTTTTCCCACCACCAAATTCAGTTACTCCAAACAAGAACACCCATTTCAAAGTTTACAACGTTTTTCATATAGTAGCAATGGGTTTAAGAAAGTTTCTTCCTTTATTGCTTTTGCGGTAAACGACAATTCCACTGTCAAAACGACACAGAAAAGCTACGGCAAAAACTCGAATAGGAAGGATGGTAGAAACCCGTTTTTGAGTGAGGGGAGAGATGATGATGAAACTCGTGGAACCATTTGTCCTGGTTGTGGAGTTTTCATGCAAGATAATGATCCTAACCTTCCTGGGTTTTACCAACAAAAGAAGGTGAAAATTGAAGATTTTTTAGATGATGATGATGATGAAGTAGTTGTAGTAGAAGAAGATGATGATGGTGATGATCATGACATTGAAGAAGATAATGGGGGGTTAAAAGATGAGGTTGACTGGGATTTAGATGAGTTGGAAGCTAAGTTTCTCGGTGAAGAGGTTGATGATGAGTTGGATTTGAATGGATTTGCGCTTCCAGGGGTTGGGTATGGTAACATTACTGAGGAAGTTTTGAAGAGGATGAAGAAGAAAAAGGTGTCGAAAGCCGAGAAGAAAAGGATGGCTAGGGAGGCTGAGAAGGTGAAAGAAGAGGTTACTGTGTGTGCTCGATGTCATTCCTTGAGGAATTATGGACAAGTGAAGAACCAAATTGTTGAGAATTTGATACCTGATTTTGATTTCGATAGGTTGATTTCAACCCGGCTGATGAATCCTTCTGGCAGTGGGAGTTCCACTGTTGTTGTCATGGTTGTGGATTGTGTTGATTTTGACGGTTCTTTCCCTAGGACGGCGGCGAAAATGTTGTTTAAGGCATTGGAAAGATTCCACGGCAACTCGAAGCAGGGCAAGAAACTGCCTAAGCTTGTTCTGGTGGCAACAAAGGTTGATCTCCTTCCGACCCAGATTTCTCCTACAAGGTTAGATAGATGGGTTCGACACCGCGCAAGTGCTGGTGGAGCGCCTAAGTTAAGTGGGGTTTATCTTGTTAGTTCTCGTAAGGATCTAGGGGTAAGGAATTTGTTGTCCTTTATTAAGGATTTGGCTGGTCCTCGTGGGAATGTGTGGGTACTTGGGGCTCAAAATGCAGGGAAGTCTACTTTAATCAATGCATTCGCGAAGAAAGAAGGAGCCAAAGTTACAAAGCTCACCGAAGCTGCAATTCCAGGGACAACACTTGGGATCTTAAGAATTGGGGGAATTTTGTCAGCAAAGGCTAAGATGTTCGACACTCCAGGGCTCCTGCATCCGTATTTAATGTCCATGAGATTGAACCGGGATGAGCAAAAGATGGTTGAAATACGGAAGGAACTTCGGCCTAGGACATATAGGATCAAGGCAAGTTACTCATTGCTATTACTGTTTACTATCCTGGATGTAGGGCAGGCAATACATGTTGGTGGCTTGACGAGACTTGATCTTACAAAAGCCTCTGTTGAAACAATATACGTAACAGTTTGGGCATCTCCAAATGTTTCGTTACACATGGGGAAAATAGAAAATGCTGATGAGGTTTTGAGTAATCATGTTGGTGTCAGGCTTCAGCCCCCCATTGGTAATGACCGAGCTGCCGAATTAGGAACATGGCAAGAAAGGGAAGTAGAAGTGTCGGGATCAAGTTGGGATGTCAACAGCATAGACATAGCAATAGCTGGTTTAGGTTGGTTCTCTTTAGGTCTCAAAGGTGAAGCAACCATGAAACTATGGACATTTGATGGTGTTGAAATGACTTTGAGAGAACCTTTGGTCCTTGATCGAGCCCCATTCCTCGAGAAACCGGGTTTTCTGCTACCGAAAGCCATTTCTGAAGCTATTGGCAACCAAACTAAACTTGAAGCTCAAAGAAGGAAAAAACTTGAAGATGAGGCTGAAGAATATGTAGGTGCAGAGGCAGAACTATGTACTTGA 1974 0.4271 MAIFLSTILVPSLFPTTKFSYSKQEHPFQSLQRFSYSSNGFKKVSSFIAFAVNDNSTVKTTQKSYGKNSNRKDGRNPFLSEGRDDDETRGTICPGCGVFMQDNDPNLPGFYQQKKVKIEDFLDDDDDEVVVVEEDDDGDDHDIEEDNGGLKDEVDWDLDELEAKFLGEEVDDELDLNGFALPGVGYGNITEEVLKRMKKKKVSKAEKKRMAREAEKVKEEVTVCARCHSLRNYGQVKNQIVENLIPDFDFDRLISTRLMNPSGSGSSTVVVMVVDCVDFDGSFPRTAAKMLFKALERFHGNSKQGKKLPKLVLVATKVDLLPTQISPTRLDRWVRHRASAGGAPKLSGVYLVSSRKDLGVRNLLSFIKDLAGPRGNVWVLGAQNAGKSTLINAFAKKEGAKVTKLTEAAIPGTTLGILRIGGILSAKAKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELRPRTYRIKASYSLLLLFTILDVGQAIHVGGLTRLDLTKASVETIYVTVWASPNVSLHMGKIENADEVLSNHVGVRLQPPIGNDRAAELGTWQEREVEVSGSSWDVNSIDIAIAGLGWFSLGLKGEATMKLWTFDGVEMTLREPLVLDRAPFLEKPGFLLPKAISEAIGNQTKLEAQRRKKLEDEAEEYVGAEAELCT 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0280 657 MobiDBLite consensus disorder prediction 66 87 - -
Lal20g0280 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 457 IPR027417 -
Lal20g0280 657 Coils Coil 200 220 - -
Lal20g0280 657 Gene3D - 263 439 IPR027417 -
Lal20g0280 657 CDD YqeH 224 436 - -
Lal20g0280 657 Pfam 50S ribosome-binding GTPase 377 452 IPR006073 GO:0005525
Lal20g0280 657 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 20 649 - -
Lal20g0280 657 MobiDBLite consensus disorder prediction 59 87 - -
Lal20g0280 657 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 20 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0280 Lal-Chr20 2090968 2094343 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0280 - - gmx:100805561 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0280 20 2090968 2094343 Lal20g0280 20 2090968 2094343 ECH