Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0278 ATGGCCGGTCTAAATAAATCTTCTTCATCTAATTCTTCACAGTCACGTGTTTTACTCCTTTTAACTATCCTCCCCATCACCCTCGCTTCTATTGCTTTTATCCTCCAATGGCGTGGTTGGGTCATTGATGACCCCATCACCCGCGGGTCACTCGATCATTCTCAATTCCCTGGAATGTCTCTTTCTTTTTCTAAACAATCTCATTCTGATTGTTCTTCTTCTCTCTTCCCTCACTCTCATTCACTTTCTCTTTCACTTTCTTTCCCTTTTTTTCATCACTCCAAATTCGATTTCTCTTCTCATCTTAAACCCAAGGTTTGTATTACAACGACTACTTCAGCTGGTTTGGAGCAGATTCTGCCATGGATGTTCTATCACAAGGTTATTGGAGTTTCAAATTTCCTTCTTTTTGTTGAAGGGAAGGCTGCTTCTGCCAATGTGTCTAGAGTTTTAGAAAGCATTCCGGGGGTAAAAGTTATATACAGAACAAAAGAATTAGAGGAGCAGCAAGCTAAAAGTCGCATATGGAACGAGACTTGGTTGTCGAACTTTTTCTACAAACCATGTAACAATGAGTTGTTTGTGAAGCAAACTCTGAACATGGAAATGGCCATTGTCATGGCAAGGGATTCTGGAGTGGATTGGATCATCCATGTGGACACTGATGAGCTCATACATCCAGCAGGAACCGAAGAGTACTCTTTAAGACAGTTGCTGTCTGACGTGCCTGAAAATGTTGATACGGTTATCTTTCCAAACTATGAGAGCTGTGTTGAGCGAGACGATGTCAAGGAGCCTTTCAGTGAGGTTTCAATGTTCAAGAAGAACTACCAACACATGACAAAGGAAATATATATTAGAAATTACGACGATGCAACTCGTAGCAATCCAGATTATTTTCTTACTTATGGAAATGGGAAATCAGCTGCTAGGATTCAGGATGATCTCCGTCCAGATGGTGCTCACAATTGGGAAAACTATATGAAGACACCTGTAGAGGTCGCAATGGAAGAAGCTGCTGTTCTGCACTTTACTTACACTAAATTTTCTGATTTGACTTCAAGACGTGATCGGTGTAACTGCAAGCCTACAAAAGAAGGTGTTAAAAAATGCTTCATGTTGGACTTTGACAGATCTGCTTTCATAATTGCTTCAACTGCGACTGAGGAAGAAATGCGTCAATGGTACCGTGAGCAAGTTGTGTGGACTGACAAAAAACTAAACTCGAAACTGTTGAAGAACGGTGTCTTGACCCGCATTTATGGTCCCATGGTTATTATTCAAAGCTTGAGGGAATCTGGTGTTTTTAGTTCTGTGATTGCAAAAGCTGCCGAAACAACATTATCAAAAGACAATTTTTTGAAATCTGCTGAGAGTAGAAATTCAACTAGGAATGCCAGCTTAAGATTGGTTTCTTCTAGAAAAAATGATGCTGGTGGAGTATCCCAAGCAACTGCAAGAAGAGTCTTGGAAGTTATAGATAGGTCAGTCCCCTCGGCAACCCCGCCATTATCTCCGCCGAGCCCCGATCACTCCGATCTCATTACATATCAGTTTTCAACCAACTCCTTGCACTCCAACACTTGA 1587 0.4134 MAGLNKSSSSNSSQSRVLLLLTILPITLASIAFILQWRGWVIDDPITRGSLDHSQFPGMSLSFSKQSHSDCSSSLFPHSHSLSLSLSFPFFHHSKFDFSSHLKPKVCITTTTSAGLEQILPWMFYHKVIGVSNFLLFVEGKAASANVSRVLESIPGVKVIYRTKELEEQQAKSRIWNETWLSNFFYKPCNNELFVKQTLNMEMAIVMARDSGVDWIIHVDTDELIHPAGTEEYSLRQLLSDVPENVDTVIFPNYESCVERDDVKEPFSEVSMFKKNYQHMTKEIYIRNYDDATRSNPDYFLTYGNGKSAARIQDDLRPDGAHNWENYMKTPVEVAMEEAAVLHFTYTKFSDLTSRRDRCNCKPTKEGVKKCFMLDFDRSAFIIASTATEEEMRQWYREQVVWTDKKLNSKLLKNGVLTRIYGPMVIIQSLRESGVFSSVIAKAAETTLSKDNFLKSAESRNSTRNASLRLVSSRKNDAGGVSQATARRVLEVIDRSVPSATPPLSPPSPDHSDLITYQFSTNSLHSNT 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0278 528 PANTHER GLYCOSYLTRANSFERASE-LIKE KOBITO 1 6 513 IPR044224 GO:0009737|GO:0030244
Lal20g0278 528 Pfam Glycosyltransferase family 92 106 353 IPR008166 -
Lal20g0278 528 PANTHER GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN 6 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0278 Lal-Chr20 2074766 2080767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0278 - - aprc:113861500 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1671 1 19156845 19162995 Lal20g0278 20 2074766 2080767 LSH