Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0277 ATGTTATGGAACACTTGGCAACAACTTGCCTCCCCCAAAGGATGTTGTGCATCTCTTCAAAGGATGAGAATCTATAATCCAAACCCACAAATCCTCCAAGCTCTACAAGGTTCCAACATTGAGCTTGTGCTTGGTATCCCAAATGCAAAAATGTGGGTCCAAGACAATGTCAAAGCCTATGCCAATGTCAAATTTAGATACATTGTTGTGGGAAATGAAGTAAAGCCTAGTGACCCTTTTGCAAAATTTATAGTGCCTGCCATGCAAAACATTCAAACGGCCGTTTCTGAACCAGTAGCAGGGAAAGAAATCAGAGTTACCACTGCTATTGAATCTAGTGCCTTGGCACAATCATCCCCACCATCAATTGGCGTATTCAGAGCTGATTATCTTGAAGCATTTCTTGATGGTGTTATAAAGTTTCTAGTGCTTAATCATTCCCCATTAGTTGCTAAAGTGCACCCTTACTTCATTTATGCTAGAAACCCTACGAACGTTAATTTTTTTCGTGCTATTTTCAGTAGAAATGTTACTGTAGTGAAAGATGGTAAATTTGAGTATAAGCACCTTTTTGAGGAATCTGTGGATTCTGGATGGCCTACATCTGGTGGTGGCAACACCACTACACTTGATTATGCAAGAGCTTATAACACTAGAGTGCCTTACTATGTGAGGTATGGTACTCCAAAAAGGCCTGCAGTACCCATTGAAGCTTATGTGTCTTCCATGTTTGATGAAAATCAGAAGACTCATGAGAATGAGAAATTTTGGGGGCTCTTCCTTCCAGATAAGAAGCTTAAATATTCATGA 810 0.4 MLWNTWQQLASPKGCCASLQRMRIYNPNPQILQALQGSNIELVLGIPNAKMWVQDNVKAYANVKFRYIVVGNEVKPSDPFAKFIVPAMQNIQTAVSEPVAGKEIRVTTAIESSALAQSSPPSIGVFRADYLEAFLDGVIKFLVLNHSPLVAKVHPYFIYARNPTNVNFFRAIFSRNVTVVKDGKFEYKHLFEESVDSGWPTSGGGNTTTLDYARAYNTRVPYYVRYGTPKRPAVPIEAYVSSMFDENQKTHENEKFWGLFLPDKKLKYS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0277 269 SUPERFAMILY (Trans)glycosidases 19 268 IPR017853 -
Lal20g0277 269 Pfam Glycosyl hydrolases family 17 19 197 IPR000490 GO:0004553|GO:0005975
Lal20g0277 269 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 268 IPR044965 GO:0004553|GO:0005975
Lal20g0277 269 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 18 268 - -
Lal20g0277 269 Gene3D Glycosidases 8 196 - -
Lal20g0277 269 Gene3D Glycosidases 197 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0277 Lal-Chr20 2060015 2060824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0277 18 268 Glycoside Hydrolase AT3G57240 42.606 3.62e-67 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0277 - - gmx:100795474 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0277 20 2060015 2060824 Lal20g0277 20 2060015 2060824 ECH