Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0276 ATGGTGCCAAAAGATTATGTTTTACATGAACATATGAACTTTTTATCCATCAAAATTTTCATATTCATACTTATACTCCTTAACTTCATTCATAAAGCCAACACAGGATGCAATAACTCTACTATCACTTCATTCATTCCACCTTATCAGATTCTCTCATCACTTCAAACACTATCTCTTGATGGTTACTTAAGCTTAAAGAACAATGACAACACTGCCAAGGATTTTGGCAACATATACCATTTTCCACCTCTTGCAGTGTTGCATCCAAAAACAGTTTCTGATATATCACAAACCATAAAGCATATTTATGAAACTGGTTCTTCTTCAGTGTTGAAAGTTGCTGCTAGAGGCCATGGTCATTCCCTTCAAGGCCAATCACAAGTACATGGAGGGTTGGTGATTAATATGGAGTCACTTGAGGGTCCTGAAATGAAAGTTTATAGTGGAGAATTTCCTTATGTTGATGTATCTGGTGGTGAGTTATGGATAAATATTCTGCATGGTACTCTTGAACATGGGTTGGCACCAAAATCTTGGACAGATTATCTTCACCTTACTGTTGGAGGAACTCTATCAAATGCTGGAATAAGTGGACAAGCCTTTAGGCATGGACCACAGATCAATAACATCTTCCAGCTACAAGTGGTCACAGGAAAAGGAGAGGTAGTAACATGCTCAGAGAACAAAAATGCAGAACTTTTTCATGGTGTTCTTGGAGGACTTGGTCAATTTGGCATAATCACAAGGGCTACAATTTCTCTTGAACCAGCACCTAAGATGGTGAAATGGATTAGGGTGCTATACTCAAAATTCTCTCTGTTTTCCAAGGATCAAGAGTACTTGATATCACTTGAAAACACATTTGATTACATTGAAGGATTTGTAATCATAAATAGAAACAACATTCTAAATAATTGGAGTTCATCTTTTAGTCCTAAATATCCAATTCAAGCAAGCCAATTCAATTCTGATGGAAGGATCTTATACTGTCTTGAGATGGCAAAATACTTCAATCCAGATGAAGCTGAAGTAATGAATCAGAGTGTTGATCAACTTCTATCAAGATTGAGTTATATTCTACCCACACTCTTTCTATCAGAAGTTCCTTATGTAGAATTCTTGGACAGGGTTCATGTTTCTGAGAAAAAGCTAAGAGCAAAAGGCTTATGGGAAGTTCCTCATCCCTGGTTGAACCTCTTAGTCCAAAAGAGTGAGATTCATGACTTTGCTGAAGAAGTATTTGGCAAAATCCTTAATAAGGACACAAATAATGGCCCCATACTCATTTACCCTGTCAACCAAACAAGATGGAACAGTAAAACATCATTGGTTACCCCAGAGGAAGATGTTTTCTACTTGGTAGCATTTCTTTCCTCTGCAGTCCCATCTTCTACAGGTTCAAACAGTTTAGAATACATTCTAACACAAAATCAAAGGATCCTAGATTTCTGCAAACATGCCAAACTTAAGGTCAAGCAATATCTTCCTCATTACACTACTCAAGAAGAATGGAAAACCCACTTTGGGTCTAGTTGGGAAGCATTTGTGGAAAGAAAAACAACATATGACCCACTTGCACTGCTTGCCCCTGGTCACAGAATCTTTCAAAAGTCAATGTCTACCCGATAG 1632 0.3756 MVPKDYVLHEHMNFLSIKIFIFILILLNFIHKANTGCNNSTITSFIPPYQILSSLQTLSLDGYLSLKNNDNTAKDFGNIYHFPPLAVLHPKTVSDISQTIKHIYETGSSSVLKVAARGHGHSLQGQSQVHGGLVINMESLEGPEMKVYSGEFPYVDVSGGELWINILHGTLEHGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQINNIFQLQVVTGKGEVVTCSENKNAELFHGVLGGLGQFGIITRATISLEPAPKMVKWIRVLYSKFSLFSKDQEYLISLENTFDYIEGFVIINRNNILNNWSSSFSPKYPIQASQFNSDGRILYCLEMAKYFNPDEAEVMNQSVDQLLSRLSYILPTLFLSEVPYVEFLDRVHVSEKKLRAKGLWEVPHPWLNLLVQKSEIHDFAEEVFGKILNKDTNNGPILIYPVNQTRWNSKTSLVTPEEDVFYLVAFLSSAVPSSTGSNSLEYILTQNQRILDFCKHAKLKVKQYLPHYTTQEEWKTHFGSSWEAFVERKTTYDPLALLAPGHRIFQKSMSTR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0276 543 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 84 119 IPR006093 GO:0016491
Lal20g0276 543 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 17 540 - -
Lal20g0276 543 Pfam FAD binding domain 84 227 IPR006094 GO:0050660
Lal20g0276 543 Gene3D - 70 536 IPR016167 -
Lal20g0276 543 ProSiteProfiles PCMH-type FAD-binding domain profile. 80 258 IPR016166 GO:0071949
Lal20g0276 543 SUPERFAMILY FAD-linked oxidases, C-terminal domain 259 536 IPR016164 GO:0003824|GO:0050660
Lal20g0276 543 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 259 536 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lal20g0276 543 Gene3D - 137 260 IPR016169 -
Lal20g0276 543 PANTHER GULONOLACTONE OXIDASE 17 540 - -
Lal20g0276 543 Gene3D - 261 495 IPR016170 -
Lal20g0276 543 SUPERFAMILY FAD-binding/transporter-associated domain-like 72 257 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0276 Lal-Chr20 2032430 2036967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0276 K00279 - gmx:100777568 864.374