Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0266 ATGGGTGGTATGGTAATGGTGTGGGAAAATCTAACAGTGGAACTTCGTACTTTTGGAGAAGATTCTTCTCATAACAAGAAGCTTCTTAATGGACTCACTGGTTTTGCTCAACCTGGTAACATCATGGCTGTTATGGGTTCTTCTGGTTCCGGCAAAACCACCCTACTCGACTCTTTAGCAGGAAGACTTGATGCAAATGTTATAGTGAGAGGTAGCATTTTCATGGATAGGAAGAAGAGAAACTTAAATTGCAGAGAAGTGTCTTATGTTGCTCAAGAGGAACTTCTATTAGGAACTTTGACTGTAAGAGAAACTCTAACATACTCTGCAAACATGAGGCTTCCTTCAAAAATGAGCAAAGAAGAGATAAATAGAGTGGTTGAAGAAACAATAATGAAAATGGGTCTAGAAGAATGTGCAGATAACACTATTGGTAATTGGCATTTAAGGGGTCTAAGTAATGGTGAAAAGAAGAGACTTAGCATTGGTCTTGAGATTTTGACACAACCCCATGTCTTACTTCTTGATGAACCTACTACTGGACTTGATAGTGCTTCAGCATTCTATGTAATTCAAGCTCTAACAAACATAGCTTCTAATGGTGAAAAGATTATTATTTGTTCCATTCATCAGCCAAGTAGTGAAGTTTTTAATCTTTTTCATGATTTGCTCTTGCTTTCAACTGGAGAAACTGTTTATTTTGGACAAGCAAAGACGGCACTTAAGTTTTTTGCTGATGCAGGGTTCCCTTGTCCTACTAGAAGAAATCCTTCAGATCATTTCCTTATGTGTATTAATTTGGACTTTGACTTGATTAATGAAACTCTAGCAAGATTACAATTAAGTACATTAACATCATCAAATTTTGTTGTGAGGATGAGAACAGCAGAGATTAGAGCAACACTTATAGAGAGTTACAAATGTTCAGAGCTAATGATGAATACAAGAAGAAGAATTCAAATGCTACAACCCAATGTAATACAAATTCTACTTTCATTGTCTTGTATACAATTTGTTCTATATCCTACTGAGCTTAAGGATGCAAAGATGCAGGAAGAGGAAGTAATTGAGTCCAAGGTTAGGAGAAGTACAAGCTGGTGGAAGCAACTAAGGACAGTGACCCAGAGATCTTTCCTAAACATGTCTAGGGACATTGGTTACTACTTGCTAAGGATCATATTTTACGTAGTGGTGTCAATCACTATTGGTATCATATTTTTTCATATAGGCACAGATAGTAACTCAATATTGGCTAGAGGAAAGTGTGTATCATTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGGCTACCATTTTTCATTGAAGAATTGAAGTTGTTCCAGGTTGAAAGGTCAAAAGGGCATTATGGAGAGGCTGCATTTGTTTTAGCAAACATTATATCATCATTCCCTTTCCTTCTTGTGATATCACTCTTCTGTGGAGTAATTATATACTTCATGGTGCAATTTCATCCTGGTGCAACTAATCTTGCATTTTTCTGCATCAACTTGTTTTGCTGTCTTTCTGTTGCTGAGACATGCATCATGACTGTAGCCTCAGTGGTCCCTAATGTATTGATGGGCATAGGAACAGGAACTGGTGTATTAATTTTCATGATGATGCCCTCTCAAATCTTCAGACGTCTACCGGATATTCCAAAGTTCTTTTGGAGATATCCCATGTCTTACCTCAGTTTTACTACTTGGGCAATGCAGGGACAGTATAAGAATGACATGCTGGGTCTTGAATTTGATCCTCTGCTACCCGGGAACCCGAAACTTAGTGGAGAACAAGTCCTCACATTGGTATTTGGGGTTCCATTGGATCATGGCAAATGGTGGGACTTAACTGCACTGATTACCTTACTATTACTTCACAGATTGATTCTTTTCTTAGTACTTAAGTATTACAGAAGATCAGAATCAACAATGCTGTGGTTTTATGTCAAGGAAAGAATACAATTGGCAAAAAGATGTTTGATGAGTACAAACAAGAGATATATTTCTTCAAAGAACAAAGCAGCTCCCCATCCATTATCATCTCAAGAGGGACTTATGTCCCCAAACTTTGCAATATAA 2082 0.3751 MGGMVMVWENLTVELRTFGEDSSHNKKLLNGLTGFAQPGNIMAVMGSSGSGKTTLLDSLAGRLDANVIVRGSIFMDRKKRNLNCREVSYVAQEELLLGTLTVRETLTYSANMRLPSKMSKEEINRVVEETIMKMGLEECADNTIGNWHLRGLSNGEKKRLSIGLEILTQPHVLLLDEPTTGLDSASAFYVIQALTNIASNGEKIIICSIHQPSSEVFNLFHDLLLLSTGETVYFGQAKTALKFFADAGFPCPTRRNPSDHFLMCINLDFDLINETLARLQLSTLTSSNFVVRMRTAEIRATLIESYKCSELMMNTRRRIQMLQPNVIQILLSLSCIQFVLYPTELKDAKMQEEEVIESKVRRSTSWWKQLRTVTQRSFLNMSRDIGYYLLRIIFYVVVSITIGIIFFHIGTDSNSILARGKCVSFIYGFMICLSCGGLPFFIEELKLFQVERSKGHYGEAAFVLANIISSFPFLLVISLFCGVIIYFMVQFHPGATNLAFFCINLFCCLSVAETCIMTVASVVPNVLMGIGTGTGVLIFMMMPSQIFRRLPDIPKFFWRYPMSYLSFTTWAMQGQYKNDMLGLEFDPLLPGNPKLSGEQVLTLVFGVPLDHGKWWDLTALITLLLLHRLILFLVLKYYRRSESTMLWFYVKERIQLAKRCLMSTNKRYISSKNKAAPHPLSSQEGLMSPNFAI 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0266 693 Gene3D - 8 261 IPR027417 -
Lal20g0266 693 MobiDBLite consensus disorder prediction 674 693 - -
Lal20g0266 693 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 253 IPR003439 GO:0005524
Lal20g0266 693 CDD ABCG_EPDR 3 235 - -
Lal20g0266 693 Pfam ABC-2 type transporter 369 574 IPR013525 GO:0016020|GO:0140359
Lal20g0266 693 Pfam ABC transporter 36 179 IPR003439 GO:0005524
Lal20g0266 693 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 4 325 - -
Lal20g0266 693 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 345 665 - -
Lal20g0266 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 245 IPR027417 -
Lal20g0266 693 SMART AAA_5 38 238 IPR003593 -
Lal20g0266 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 325 - -
Lal20g0266 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 345 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0266 Lal-Chr20 1918506 1923866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0266 13 247 Calmodulin-binding Proteins AT2G36910 25.926 5.59e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0266 - K05681 gmx:100802207 959.903