Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0256 ATGAGTGCAATTTCGGGTGTAATTTCGCGGCAACTTCTGCCTGCTTGTGGCACTCTTTGTTTCTTCTGCCCTGCCTTAAGGGCAAGGTCCAGACAGCCAGTGAAGAGGTACAAGAGGCTCATTGTTGATATTTTCCCTCGAAACCAGGAGGAAGGTCTGAATGATAGGAAAATAGCAAAACTATGTGACTACGCTGCCAGAAATCCTTTACGCATCCCAAAGATCGTGACGGCCCTTGAGCAAAGGTGTTACAAGGAACTACGGAATGAGAATTTCCATGCAACAAAAATAATCATGTGCATTTACCGGAAATTTCTGTCTTCTTGTAAAGAACAAATGCCACTGTTTGCGAGTAGCCTGCTAACTATTATTCACACACTGCTTGATCAATCACGGCAGGATGAAATGAAAATTGTAGGATGTCACATTCTTTTTGATTTTGTAAATAATCAGACTGATGGAAGTTACCTGTTCAACTTAGAAAGTATTATCCCAAAGCTTTGTCAATTAGCTAAAGAAACAGGGGACGATGAAAGGGCAAGAGCTAATCGTTCAGCTGGTTTACAATCCATCTCATCAATGGAGTCAAATGATCTTTGTGCTTGTACAACACGAGTTGGAGATTTTTATTTGTTTCTTTGGCATGAGACAGGCTCCTTGGTTCTAAGGTGTACAAGAAAGGAAGGGAAATGCAGAAGTGGATTAGGAACTGCTGTGAGTAGTGTTCGGTTTATGGGTGAACACTCTCACATATCAGTTGAGTTTGACAATATTGTTTCTGTTGTCTTGGAAAACTATGGAGGTCCTAAGGAAAATTCAGCAAACCTTGATCATGAGGAACAAGGTCCTGAAAATAAGTGGGTCCAAGAAGTGATGACAAATGAGGATCACATCTCTCCTTTGCTGGATGTCAAGAAGAGGAATCCATCCTGGAGTACAATTGTTAACGACAAAGGCGAAGTTATTGTGGCAGAGGAACATGCCAAGAATCCAGGTTTTTGGTCTGGGGTTTGCCTACATAATATGGCCAACTTAGCCAAGGAGGGTGCTACCATACGTCGTATAATGGAATCTTTATTCCGATACTTCGATGATAGAAGTTTATGGTCTATAAACCATGGCCTTGCCTTTTCCGTTTTAAGGGATATGCTCTTTTTAATGGATGATTCTGGCAAAAATACACATGTTTTGCTTTCAATGTTAATTAAGCATGTGGATCATAAAACTGTCCTCAAAGAACCCAACATGCAGCTAGACATAGTTGAGGTCACCACTTCGCTTGCCCAATATGCAAAGGTCCAATATTCTATATCAATAATTGGTGCGTTAAGTGATGCGATGAGACATTTGCGGAAGAGCATCCATTGTTCCCTAGATGAGTCAAATCTGGGCACTGATGCGATTGATTGGAACAGGAATTTCAGAGAAGCTGTGGATAAATGCCTTGTTCAGTTATCAAATAAGGTTGGAGAAGCAGGCCCAATCCTTGATGTTATGGCTGTGATGTTGGAGAATCTCTCAACTATTACGGCAACATCCAGAACCTCAGTTTATGCTGTCTATCGGACTGCTCAAATTGCATTTCCTGAGGCATTGTTTCATCAACTACTCCAGGCTATGGTCCATCCAGATCATGAAACGCGAGCGGTGGCCCATCGCATCTTTTCTGTTGTTCTTGTGCCAACCTCTTTTTTCCCTCGGTCATATGCCAAGACACTGGGCCTTCCACGAACACTGTCGAGAGCAGTCTCTGTGTTCTCTTCTTCAGCTGCCTTGTTTGAAAAGCTAAGACTAGAGAAGCGCTCTTCAAATGAAAGTTTACATCCATATAACAAAGAAAATACTAGAGGAGAGATTGAACCAGCTAATAGCAATGGTGGGATCCTAAACAAATTGAAGTCAACCTATAGTCGGGTGGATAGTGTGAATAACTCCCCTCTACTCACGACAGAAGATGAAATTACTGCAAACAGTGATATTAATAACTTGGACTCTGCAAGCCTCAGGCTGAATAGTCATCAGATAACCCGATTGCTATCATCAATTTGGGCACAGTCTCTCTCACCTGAAAATATGCCTGAAAATTATGAAGCAATTGCTCATACATACAGCTTGGTGTTGCTTTTTTCTAGAGCTAAGAATTCATTTCACGAGGTCATAGTTCGGAGTTTTCAGCTTGCCTTTTCTTTGTGGAATATGCCTTTTAAAGAAGGGGAATTGGCACCATCTCGTCGAAGATCACTTTTTACTTTGGCAACTTCAATGATTTTGTTTTCTTCAAAAGCATGCAACATTGTCTCTCTTGCACATAGTGCCAATGCATTGCTTATAGAAAGGAAGGTTGACCCCTTCCTTCATTTGCTTGGAGATTACAAGCTGCAAGCTGTCGGATCTGCACCTGAAAATCTGACTATCAAGTATGGATCCAAAGAAGATGATCACCGGGCCTTGGACACATTTTCGGAGTTATCTAGTTTGACACACCAAACACATGAAGTCTTTGCTCCTGAAATCATTAGGAGCTTGGAAATTTTTTCGAAAACTGAATCATCCTCAATAAAGGAGCAGCTGCTACAAGAATTCTCACCAGATGATATGTGTCAACTTGGATCTCGATTGGCCATGAATATGCCGGAAAAGGATGCTTCAGCAATTTCATTTGACGATGACTCTATTCACGACTCATTTGGAAGTCAAACAAAACACAATCCAGGATTGTCCATGGAGATCTCTAGTATTATTGGTGCTAATCAACTTCTAGATTTAGTTTTGGATCCATCTCATCAATCTGGGAGGATTTCTATATCAACTGCATGTAATATGCCTTACGAGGATATGGCTGATAACTGTGAGGTACTTCTAATGGGAAAGCAGAACATGTCGAGATTGATGAGTACTCAACTGAAACAAGAATGTTTGGTGGACTCCTTTTTACCAAATCATGACACCGAATCGAAAAATCTTGGTTTATCTTCCCATATAGATGCGGGTTTTCAATGTCAGAAGGTGGGAAATCCTTTCCTTGATGAGAATATTGCTGTGGATTTGTACAGACCAACTTCTGATCCTGTTCCAATGTTGTGTGCATCTGAATATCAGAATCTTCCTTACCTATTCAAACTGCCAGCAACGAGCAAATATATAATATCTGCTATAGTTGCATCATTTGGAGTTGCGTATGTCTGTGATCATATCATTTCAGACAACAAGATATTTGGAGGTACCACCCCTGGCACTGTTTCAAACAAGGATTGGTGGGAAGAGACTGACAAAAAGTTTCAGTCATGGCCTCGTACTGCTGGACCACCAGTGGTCATGAATCCCATAAGCCGCCAAAATTTCATCGTGAAGCCTCGCTCTGAGTAG 3366 0.4127 MSAISGVISRQLLPACGTLCFFCPALRARSRQPVKRYKRLIVDIFPRNQEEGLNDRKIAKLCDYAARNPLRIPKIVTALEQRCYKELRNENFHATKIIMCIYRKFLSSCKEQMPLFASSLLTIIHTLLDQSRQDEMKIVGCHILFDFVNNQTDGSYLFNLESIIPKLCQLAKETGDDERARANRSAGLQSISSMESNDLCACTTRVGDFYLFLWHETGSLVLRCTRKEGKCRSGLGTAVSSVRFMGEHSHISVEFDNIVSVVLENYGGPKENSANLDHEEQGPENKWVQEVMTNEDHISPLLDVKKRNPSWSTIVNDKGEVIVAEEHAKNPGFWSGVCLHNMANLAKEGATIRRIMESLFRYFDDRSLWSINHGLAFSVLRDMLFLMDDSGKNTHVLLSMLIKHVDHKTVLKEPNMQLDIVEVTTSLAQYAKVQYSISIIGALSDAMRHLRKSIHCSLDESNLGTDAIDWNRNFREAVDKCLVQLSNKVGEAGPILDVMAVMLENLSTITATSRTSVYAVYRTAQIAFPEALFHQLLQAMVHPDHETRAVAHRIFSVVLVPTSFFPRSYAKTLGLPRTLSRAVSVFSSSAALFEKLRLEKRSSNESLHPYNKENTRGEIEPANSNGGILNKLKSTYSRVDSVNNSPLLTTEDEITANSDINNLDSASLRLNSHQITRLLSSIWAQSLSPENMPENYEAIAHTYSLVLLFSRAKNSFHEVIVRSFQLAFSLWNMPFKEGELAPSRRRSLFTLATSMILFSSKACNIVSLAHSANALLIERKVDPFLHLLGDYKLQAVGSAPENLTIKYGSKEDDHRALDTFSELSSLTHQTHEVFAPEIIRSLEIFSKTESSSIKEQLLQEFSPDDMCQLGSRLAMNMPEKDASAISFDDDSIHDSFGSQTKHNPGLSMEISSIIGANQLLDLVLDPSHQSGRISISTACNMPYEDMADNCEVLLMGKQNMSRLMSTQLKQECLVDSFLPNHDTESKNLGLSSHIDAGFQCQKVGNPFLDENIAVDLYRPTSDPVPMLCASEYQNLPYLFKLPATSKYIISAIVASFGVAYVCDHIISDNKIFGGTTPGTVSNKDWWEETDKKFQSWPRTAGPPVVMNPISRQNFIVKPRSE 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0256 1121 Pfam Protein of unknown function (DUF1138) 1045 1117 IPR009515 -
Lal20g0256 1121 SUPERFAMILY ARM repeat 70 558 IPR016024 -
Lal20g0256 1121 PANTHER CYCLIN-LIKE PROTEIN 5 194 - -
Lal20g0256 1121 PANTHER CYCLIN-LIKE PROTEIN 231 1047 - -
Lal20g0256 1121 PANTHER PUTATIVE, EXPRESSED-RELATED 5 194 - -
Lal20g0256 1121 PANTHER PUTATIVE, EXPRESSED-RELATED 231 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0256 Lal-Chr20 1833821 1848598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0256 K21842 - gmx:100817296 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0256 20 1833821 1848598 Lal20g0256 20 1833821 1848598 ECH
Lal1g1691 1 19337666 19339665 Lal20g0256 20 1833821 1848598 LSH