Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0253 ATGTTGAATAATCACTTTGGTTCCACTAGCCATGGAACACAATATGATGATCAAGAAGATGAAGAAATAGTTAGAGAAATCCATGCCTTGACCCCACCACACCCTCCACCACCACCAACAACAAGAAGACATAGCCATAGGTCATCTTCTATGTCCTTGGCTAGCACAGAAGGTGGTGCTTCTAGTGAGAATTTTACAAGCATGAGTAGAGAGTTTAATGCTTTGGTTATAGCAGGGTCAAGTATTGACCATAACAACATGACTCCTATGATGATGAATTATGGTCATGAAGATGAAGTTGTAGGAGGGAACAACAACAACAACAACAACAACAATAATAACTTGGGGAGAATTGGTGAAGATGATTTGATGGAAGAGACTAACCCTTTGGCTATTGTGACAGATAACCACCCTTTTGATCCAGTTCCATCTTCAATGAGACCTAATAGTGGTAGTGGAAGAGGTCAAAGTAGTGAAGAAGTGGTATCAGTTGAAAGGGTGAAGAAGGAGGAGGTTGATGCAAAGATATCAGCTTGGCAAAATGCAAAGATTGCTAAGATTAACAACAGGTTCAAGAGAGAAGATGCTGTGATCAATGGGTGGGAAAGTGAGCAGGTTCAGAAGGCTTCCTCATGGATGAAGAAAATTGAGGCTAAAACATCATCCACTTGGATAGATGTCTACATAAATGTCAACCACCCAATTAGGAGGAAGCTAGAAGAGAAAAGAGCAAGAGCTTTGGAGAAAATGCAAAACAATGTAGCAAAAGCTCATAGGAAAGCAGAAGAAAAGAGGGCATCATCTGAGGCTAAAAGGGGAACTAAAGTTGCTAGGGTTCTTGAGATTGCTAACCTCATGAAAGCTGTTGGAAGACCTCCTTCCAAAAAATCATTCTTCAAACTTGTATAA 909 0.4037 MLNNHFGSTSHGTQYDDQEDEEIVREIHALTPPHPPPPPTTRRHSHRSSSMSLASTEGGASSENFTSMSREFNALVIAGSSIDHNNMTPMMMNYGHEDEVVGGNNNNNNNNNNNLGRIGEDDLMEETNPLAIVTDNHPFDPVPSSMRPNSGSGRGQSSEEVVSVERVKKEEVDAKISAWQNAKIAKINNRFKREDAVINGWESEQVQKASSWMKKIEAKTSSTWIDVYINVNHPIRRKLEEKRARALEKMQNNVAKAHRKAEEKRASSEAKRGTKVARVLEIANLMKAVGRPPSKKSFFKLV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0253 302 Coils Coil 236 267 - -
Lal20g0253 302 MobiDBLite consensus disorder prediction 134 162 - -
Lal20g0253 302 PANTHER CARBOXY-TERMINAL REGION REMORIN 14 219 - -
Lal20g0253 302 PANTHER CARBOXY-TERMINAL REGION REMORIN 235 298 - -
Lal20g0253 302 MobiDBLite consensus disorder prediction 252 272 - -
Lal20g0253 302 MobiDBLite consensus disorder prediction 29 64 - -
Lal20g0253 302 Pfam Remorin, C-terminal region 171 295 IPR005516 -
Lal20g0253 302 MobiDBLite consensus disorder prediction 43 64 - -
Lal20g0253 302 MobiDBLite consensus disorder prediction 143 159 - -
Lal20g0253 302 PANTHER OS02G0116800 PROTEIN 14 219 - -
Lal20g0253 302 PANTHER OS02G0116800 PROTEIN 235 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0253 Lal-Chr20 1813994 1816890 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0253 - - adu:107492944 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0253 20 1813994 1816890 Lal20g0253 20 1813994 1816890 ECH
Lal11g1331 11 16910966 16914354 Lal20g0253 20 1813994 1816890 LSH