Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0249 ATGGAGAGAGGAGCAACAAGTGAGAACAAAGCATCACCTTTGTTCTCACTTTCCACCCCTCTTCTTCACTTGGAAAAGGATGATGAGATATCAAGCACAATTGCATCAGGCGTGACAAGGAAATTGGATACTACCCAGTGTGAGAACAACAAGGGCGAAACAATGGTTGGTATTGAAGAAGATCATATTGCAGTAAAGGGTGGCGATGTTGAGGATACATTCCTTGTGTCTGAAGACAAATACAGATCTGAAATTGGCATAATTGATGGAACTGAGGTCAATGACTGTCCTATTGAGCAAGTCAGGCTAACAGTCCCGATCACAGACGACCCTACTCAGCCAGCATTAACATTCCGGACATGGGTTCTTGGATTGGCATCATGTGTGCTCCTTGCCTTTGCAAACCAATTTTTCGGCTACAGAACGAACCCTTTAACAATTTCTTCTGTTCCAGCCCAGATTGTAACCCTGCCCCTTGGGAAACTGATGGCTGCTACTCTTCCCACAAAACCAATTCGAGTCCCATTTACGAAATGGTCTTTTTCATTGAATCCAGGGCCATTCCATTTGAAGGAACATGTGTTGATCACCATCTTTGCTACTTCAGGATCTAGTGGTGTTTATGCAATTAGCATCATCACAATTGTTAAGGCTTTCTATCATAGGAGCATCCATCCAGTGGCGGCTTATTTGTTAGCACTATCAACCCAGATGCTTGGTTATGGGTGGGCTGGGATTTTCAGAAGATTCCTCGTTGACTCGCCTTACATGTGGTGGCCTGCAAACCTTGTGCAGGTGTCTCTATTCCGGGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGTGGTAGCACTAGGCTGCAATTCTTTTTTATGGTCTTTGCAGCTAGCTTTGCTTATTGCATTGTTCCAAGCTACTTTTTCCAATCAATATCAACAATATCCTTTGTTTGCTTGGTTTGGAAAAATTCAGTCACTGCACAACAGATTGGTTCGGGCATGAAAGGCCTTGGCATTGGCTCATTTGGCCTTGACTGGAATACCGTTGTTGGCTTCTTAGGAAGCCCTTTGGCTGTGCCTGGCTTTGCTGTCATCAACATATTGGTTGGGTTTGTGCTGTTTATGTATGTTTTAATTCCCCTTTCCTATTGGAACAATGTATATGGTGCCAAGAAGTTTCCCCTCATTAGTTCTCACACATTCGACTCTACTGGTGCAATATATAATGTTACTCGGATTCTGAATACCAAAACTTTTGACATTGATTTGGATAGTTATAACAATTACAGCAAACTCTATCTTAGTATCACGTTTGCATTCGAGTATGGATTGAGCTTTGCATCTCTGACCGCCACTCTTTCTCATGTTGTTCTCTTCCATGGAAAAGCGATTCTCCAAATGTGGAGGAAGACAACTGCACTAAAAGGAGAACTTGGTGATGTGCATACAAGAATTATGAAGAAAAACTATGAACAAGTTCCTGAATGGTGGTTTGTCTCCATTTTGACTGTAATGGTTATTATGGCTTTGGTAGCTTGTGAAGGCTTTGGCAAACAGCTCCAACTGCCATGGTGGGGAATCTTACTTTCTTTAGCTACGGGGTTACTTTTCACCTTGCCGATTGGTGTCATTCAAGCAACAACGAATACGAGATTGGGAATAAACGTGATCACAGAGTTAATCATTGGGTTCATTTACCCAGGAAAGCCCCTTGCTAATGTAGCCTTCAAGTCTTATGGATACACCAGCATAACGCAGGCACTTGGGTTCCTTGGTGACTTTAAATTAGGCCACTATATGAAAATTCCTCCGAAATCTATGTTCATCGTGCAGTTAGTCGGCACAGTGGTTGCTTCATTTGTCTACTTTGGCACAGCATGGTGGCTTCTCACATCTATTGAGAACATATGTGATGAAACATTGTTGCCAGTGGGGAGTCCATGGACATGCCCTGGGGATACTGTGTTTTATAATGCTTCTATCATATGGGGGGTAGTAGGGCCGCAGAGAATGTTTACCAATGATGGCATTTACCCCGGGATGAATTGGTTTTTCCTCATCGGTATACTTGCTCCTGTTCCAGCATGGCTGCTATCTCTGAAATTTCCCAATCACAAGTGGATTCAGCTCATCAACATGCCGATTATCATCGCGGGTGCATCAAACATCCCACCAGCCAGATCTGTGAGTTATATTACTTGGGGAGTTGTTGGTATCTTCTTCAATTTCTATGTTTACAGAAAGTTCAAGGGATGGTGGGCTAGACATACTTATATTCTCTCGGCTGGTTTAGATGCCGGAGTTGCTTTCTTGGCTGTGATCCTCTATTTTTCCCTCCAGTGTTATGGTGTTTTTGGTCCAACCTGGTGGGGTCTTGAGGCTGATGATCATTGCCCTTTGGCTAAATGCCCCACAGCTCCAGGTGTATATGCTGAGGGATGCCCTATTCTATGA 2451 0.4329 MERGATSENKASPLFSLSTPLLHLEKDDEISSTIASGVTRKLDTTQCENNKGETMVGIEEDHIAVKGGDVEDTFLVSEDKYRSEIGIIDGTEVNDCPIEQVRLTVPITDDPTQPALTFRTWVLGLASCVLLAFANQFFGYRTNPLTISSVPAQIVTLPLGKLMAATLPTKPIRVPFTKWSFSLNPGPFHLKEHVLITIFATSGSSGVYAISIITIVKAFYHRSIHPVAAYLLALSTQMLGYGWAGIFRRFLVDSPYMWWPANLVQVSLFRAFHEKEKRPKGGSTRLQFFFMVFAASFAYCIVPSYFFQSISTISFVCLVWKNSVTAQQIGSGMKGLGIGSFGLDWNTVVGFLGSPLAVPGFAVINILVGFVLFMYVLIPLSYWNNVYGAKKFPLISSHTFDSTGAIYNVTRILNTKTFDIDLDSYNNYSKLYLSITFAFEYGLSFASLTATLSHVVLFHGKAILQMWRKTTALKGELGDVHTRIMKKNYEQVPEWWFVSILTVMVIMALVACEGFGKQLQLPWWGILLSLATGLLFTLPIGVIQATTNTRLGINVITELIIGFIYPGKPLANVAFKSYGYTSITQALGFLGDFKLGHYMKIPPKSMFIVQLVGTVVASFVYFGTAWWLLTSIENICDETLLPVGSPWTCPGDTVFYNASIIWGVVGPQRMFTNDGIYPGMNWFFLIGILAPVPAWLLSLKFPNHKWIQLINMPIIIAGASNIPPARSVSYITWGVVGIFFNFYVYRKFKGWWARHTYILSAGLDAGVAFLAVILYFSLQCYGVFGPTWWGLEADDHCPLAKCPTAPGVYAEGCPIL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0249 816 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 86 816 - -
Lal20g0249 816 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 100 779 IPR004813 GO:0035673
Lal20g0249 816 PANTHER ISP4 LIKE PROTEIN 86 816 IPR004648 GO:0055085
Lal20g0249 816 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 94 780 IPR004648 GO:0055085
Lal20g0249 816 Pfam OPT oligopeptide transporter protein 116 777 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0249 Lal-Chr20 1771301 1774690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0249 78 816 Organic Solute Cotransporters AT4G26590 66.712 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0249 - - lang:109348237 1601.26