Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0239 CATCCTTCTATATTGTTACTTTCTTTGTCAGATCTTGATTTCTTTTGTGAAATTGTTCAACCTGGTGCCCCTTCAAGTACTACTAGTTTTGGGGGTGGAAGCACTATTCGGGGGAGTAGGTATTGTTACTTGCTGCGGAATTTAGGAATCGAGAACTACCTTGTGCTTGCGGATCTCGCTAAGGCATTTGAAAGCATGAAAGAAATTGAGAAGAGAAAAGTTTCAAGGGATAGTCAGACAAAAACTTCAAGAAGAACGGCCTCAGATAATTCATCAAAAATATTGAATGAAAAAGGAACTGAATCTAAGACACCCCAGACTAGACCAACTTCAAATAAGTTTATAAGTGAGTCAATCACGGCCTCAGATAATTCAGAAACTTATGAAAATGTGGTTATACACTATCTGGATGATGTCAACAGGTCTGAGGAGGCACTTCTCCAGATGAAAGTTAATGAGATGGTTACTAATGAAAACAAAAATGGAGTACTTGATGACTATTCCAGTGATTTGGAGAAGGAGCAAAAAGATGGGAATGGAGTAGTTTCCGATACTGACACAGCGAAGGATTCAGTATCATCCCGAGCTGATTCTGCCACAAATGAGGATGACAAAATAGAAAAAGCTTCAAAGGGTCCTAAAAGTAAGGTTAAAGTGAACCCATCGGTAGGTAATCATGGATCGAGGGAGAGATCTGATAGAAAAACAAATAAGTTGCAACAGAAGGTATCAAGTAACAATCAAAAGAAACCTATGAACTCAAATAAAGGGCCTGCTAGAGCTACCAGCAAAAATACTTCCTTGACCAATTCTAAGGCTGTGAAAGTTCCTGTAAAAGTTTCATCTGAATCTTCTGATGGAGTTGACGAAAAACCTGTTCCAGAGGTCAAAGAAATTGAAATCCTGGAAGGATCCTCAAACGGTGCTGAGAGTTTCGGGAGTGATGATGAGAGTCATGAAACAGTTATTGTTGAAGAAAATGGTGAACATGTGGACAAGGCAGGCGTAGAATCAAAAATTGAAGAAATGGAATCACGAATTGAAAAGCTAGAAGAGGAATTGAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATATGCATGCTTGTATACATTGGGCCCAAGACAGGCGATCAACGATTGCCAAGAATACTGTTTCTGGTCTTGTTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCCAATACCATTGTGCTGAGAGAGATAGTTTCACAATCGTTTGGTAAGAGAAATGACGAGAAGTCTACCTCACCGAAATGGAAAGGTGCCTCCAATGGTAAACAAGAAAATGGTTTTATGCAACATGTTGAAGATTGGCAAGATACAGGAACGTTTACATCTGCATTAGAAAGCGTAGAGTCATGGATCTTTTCTCGGATAGTGGAGTCTGTGTGGTGGCAGGCTTTGACTCCTTATATGCAGTCTCCTACCGGGGACTCCTCTTCAAACAAATCCCTTGGGAGGCTGCTGGGACCTTCTCTTGGTGACCAGAAGCAAGGAAACTTTTCCATCAATCTCTGGAGAAATGCTTTCCAAGATGCTTTTCAACGACTCTGTCCTGTTCGTGCAGGAGGCCACGACTGTGGTTGTTTGCCTGTGTTGGCTAGAGTGGTCATGGAACAGTGCATAGCTAGACTAGATGTGGCCATGTTCAATGCTATTCTTCGGGAGTCAGCTCTCGAGATCCCAACTGATCCTATATCAGATCCTATTGTGGATTCAAAGGTTTTGCCAATTCCAGCAGGAGATTTAAGCTTTGGGTCTGGTGCACAGCTAAAAAATTCGGTTGGCACGTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGTCGAAGAATGCTTGCAAGAAAATCAAGAAAACAATGAGAATGGTGTCAGTGAACCTAAATCTTTTATTCTTCTTAACGACTTGAGTGACCTTCTAATGCTTCCAAAAGACATGCTTATGGATAGACAAATCAGACATGAGGTGTGTCCATCCATCAGTCTTTCATTGATTATACGAGTCCTCTGCAACTTCACTCCAGACGAGTTCTGCCCAGATGCTGTTCCAGGAGCTGTCTTGGAGGCCCTGAATGCTGAGACTTTTGTGGAGCGGAGATTGTCATCAGAATCCGGAAGAAGCTTTCCATATGCAGCTGCTTCGGTTGTATATAGGCCTCCCTCCACGGCTAACGTGGCAGAGAAAGTTGCAGAGGCTGGAGGAAGGTCTCACCTGGAGAGGAATGTATCAGCTATTCAGAGGAAAGGATATACCAGTGATGAAGAACTGGAGGAACTCGATTTCCCATTTACTTCCATCATTGATAAGCAGCCATCATCTCCAACTGTCACTGGTAATCACAAAGAGCAAGGGAGTCGCCCCACCACGAATGCTAGATATCATCTCCTACGCGAAGTTTGGTCCACGGGAACCTTGTAA 2535 0.428 HPSILLLSLSDLDFFCEIVQPGAPSSTTSFGGGSTIRGSRYCYLLRNLGIENYLVLADLAKAFESMKEIEKRKVSRDSQTKTSRRTASDNSSKILNEKGTESKTPQTRPTSNKFISESITASDNSETYENVVIHYLDDVNRSEEALLQMKVNEMVTNENKNGVLDDYSSDLEKEQKDGNGVVSDTDTAKDSVSSRADSATNEDDKIEKASKGPKSKVKVNPSVGNHGSRERSDRKTNKLQQKVSSNNQKKPMNSNKGPARATSKNTSLTNSKAVKVPVKVSSESSDGVDEKPVPEVKEIEILEGSSNGAESFGSDDESHETVIVEENGEHVDKAGVESKIEEMESRIEKLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYMHACIHWAQDRRSTIAKNTVSGLVLVAKSCGNDVSRLTFWLSNTIVLREIVSQSFGKRNDEKSTSPKWKGASNGKQENGFMQHVEDWQDTGTFTSALESVESWIFSRIVESVWWQALTPYMQSPTGDSSSNKSLGRLLGPSLGDQKQGNFSINLWRNAFQDAFQRLCPVRAGGHDCGCLPVLARVVMEQCIARLDVAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGTWSRWLTDMFGMDVEECLQENQENNENGVSEPKSFILLNDLSDLLMLPKDMLMDRQIRHEVCPSISLSLIIRVLCNFTPDEFCPDAVPGAVLEALNAETFVERRLSSESGRSFPYAAASVVYRPPSTANVAEKVAEAGGRSHLERNVSAIQRKGYTSDEELEELDFPFTSIIDKQPSSPTVTGNHKEQGSRPTTNARYHLLREVWSTGTL 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0239 844 MobiDBLite consensus disorder prediction 70 118 - -
Lal20g0239 844 MobiDBLite consensus disorder prediction 196 214 - -
Lal20g0239 844 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 67 840 - -
Lal20g0239 844 MobiDBLite consensus disorder prediction 806 828 - -
Lal20g0239 844 Coils Coil 333 360 - -
Lal20g0239 844 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 67 840 IPR021827 GO:0005643
Lal20g0239 844 MobiDBLite consensus disorder prediction 239 278 - -
Lal20g0239 844 MobiDBLite consensus disorder prediction 84 118 - -
Lal20g0239 844 MobiDBLite consensus disorder prediction 181 195 - -
Lal20g0239 844 MobiDBLite consensus disorder prediction 172 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0239 Lal-Chr20 1696591 1705626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0239 - - gmx:100804499 1149.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0239 20 1696591 1705626 Lal20g0239 20 1696591 1705626 ECH
Lal11g1310 11 16745968 16756570 Lal20g0239 20 1696591 1705626 LSH