Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0228 ATGGAGATTGAAGGTGCATGTGTTGTGTGGCAAGGTGCTATTTTGGGAGGAATACTCTTTTGGATTTTCTCATCTTCACACTTCAATCTCACTCAAAAGCTTAGATCTTTTCTACAACCATGGGCCACTCATCATGTTCAAACCACAACCCATATCGTCCTTCAGATCCAGAGTTACCAGCATGGATTTCTGGATACTCTTTTCTCTGGGTTGTCATGTGTTGTTTCTGTGCCATTTTACACTGCTTTCCTCCCTCTGCTATTCTGGAGTGGTCATGGCCAATTGGCAAGGCAGATGACATTGTTGATGGCGTTTTGTGATTATACTGGGAACTGCATAAAGGATGTGGTTTCAGCTCCAAGACCTCTCTCGCCGCCTGTTAGGAGAGTAGCCTCTACAAAAGACGAAGAAGATAATGCCTTAGAATATGGACTACCTTCTTCTCACACTCTCAACACAGTTTGCTTATCTGGCTATCTTTTGCACTATGTGCTGATTCATACTCAAATTCAAGGTCCCTATGTTAATTACCTTGGATTTTCCCTTGTTTGCTTGTTTGTGGCCCTCATTGGCTTAGGAAGAATTTATCTTGGCATGCACAGTTTGGTTGATATTCTTGCTGGACTTGTTCTTGGACTCGGGATCCTTGCATTTTGGCTTGTAATTGATGAGCACATAGACAGTTTTGTGACCTCAGGACAAAATGTTACGCCTTTTTGGGTTGCCCTGAGCTTCCTGTTGCTTTTTGCTTACCCAACTCCTGAACTTCCAACTCCAAGCTTTGAATATCACACTGCTTTCAATGGTGTTGCATTGGGAATTGTACCCTCCCAGGCGTTCCAAGGTCAGCTAATCGCCCGTTCAGCAGACTACCTAGATTCTGACAACCCTCTTCCAACATCGAAGAACAACTATATAAATATGTTTCCAGAATTTGAAACCCACGACCTTCAGGTGGCCGGGGTACAACAAACATACCATCAATTTCACCATGACGCAGTTCCTCATTTGTTCTCTGAAAACCTGACAATACCTGTATTTGTGGGACGAATGATGTTGGGAATACCAACAATTTTGGTAGTGAAATTCTGCAGCAAGACTCTAGCAAAATGGATTATCCCAGTTGTAGCAAACACGTTGGGCATACCAATAAGATCAAGCAGATATATAAAATCAGATAAGAAGATTAAAGAAGGAGGTTACTTGCTAACAAAGCATGAGGTATTTGATGTTGATACTGGGATTAGATTTGTTCAATATGCAGGTCTTGCTTGGTCTGTGGTGGACCTTGTTCCATCCCTTTTTACATACACAAACTTGTGA 1323 0.4218 MEIEGACVVWQGAILGGILFWIFSSSHFNLTQKLRSFLQPWATHHVQTTTHIVLQIQSYQHGFLDTLFSGLSCVVSVPFYTAFLPLLFWSGHGQLARQMTLLMAFCDYTGNCIKDVVSAPRPLSPPVRRVASTKDEEDNALEYGLPSSHTLNTVCLSGYLLHYVLIHTQIQGPYVNYLGFSLVCLFVALIGLGRIYLGMHSLVDILAGLVLGLGILAFWLVIDEHIDSFVTSGQNVTPFWVALSFLLLFAYPTPELPTPSFEYHTAFNGVALGIVPSQAFQGQLIARSADYLDSDNPLPTSKNNYINMFPEFETHDLQVAGVQQTYHQFHHDAVPHLFSENLTIPVFVGRMMLGIPTILVVKFCSKTLAKWIIPVVANTLGIPIRSSRYIKSDKKIKEGGYLLTKHEVFDVDTGIRFVQYAGLAWSVVDLVPSLFTYTNL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0228 440 Pfam PAP2 superfamily 99 220 IPR000326 -
Lal20g0228 440 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 319 440 - -
Lal20g0228 440 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 9 276 - -
Lal20g0228 440 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 9 276 - -
Lal20g0228 440 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 319 440 - -
Lal20g0228 440 CDD PAP2_SPPase1 63 220 - -
Lal20g0228 440 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 41 237 - -
Lal20g0228 440 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 47 227 IPR036938 -
Lal20g0228 440 SMART acid_phosph_2 96 220 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0228 Lal-Chr20 1599639 1604954 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0228 - - gmx:100778490 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1710 1 19552375 19559785 Lal20g0228 20 1599639 1604954 LSH