Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0225 ATGGCGGTTTCCGAAGAAGAGTGTTCTTCCACTAAGCGCGGTGGTGGTGGTGGCGCTGCTCGCTCTTTCTCTTCTTCTTCATCTGCCAGACGTTATTACCTTTCCAAGTGCGTTCTCAGAGGAAGCGTTGTTCTTCAACTCCTTTACGGTCATATTCGTTCACCAACCTCGAACGACGTCGTTTTTGCTAAGGAGACATCTATAGAATTGGCAGTGATTGGTGAGGACGGAAATGTACATTCTGTTTGTGATCAGCCTGTTTTTGGCACCATTAAGGATCTTGCCATATTGCCCTGGAATGACAAATTTCGTGCCCGCGACCCGCAGATGTGGGGTAAAGACCTTTTGGTTGCTCTATCTGATTCTGGGAAACTTTCGTTGCTCACGTTTTGCAATGAAATGCACAGGTTTTTTCCCATAACACATGTTGAACTATCTAATCCTGGAAACCCAAGAGATCTTCCTGGAAGAATGCTAGCAATTGATTCCAGTGGTTGTTTTATTGCTGCCAGTGCATATGAAGATCGGCTGGTTCTCTTTTCGATGTCAACGACTGGCAATGATATAATTGATGAGAGAATAACATATCCTTCTGAAGTGGAAGGTACTGCAGCTTCAGGTACTTCCAGAAGCATCCAGAGAACCACTATACATGGTACTATTTGGAGCATGTGCTTTATTTCGCAAAATTCCAGGCAACCAAGCAAGGAACATAATCCTTTACTAGCTGTTATTCTAAATAGGAAGGGATCACTTCTAAATGAATTGCTGTTATTGGAATGGAATATTAAAGCACATACAATCTTTGTTATTTCCATGTATGTTGAAGCTGGGCCCCTAGCACATGACATTGTTGAAGTTCCTAATTCTTGTGGACTTGCATTTCTATTCAGGGCTGGTGATGCTCTCTTAATGGATTTTAGAGATCCTCACAATCCATGCTGTGTGTATAGAACTAGCTTAAACTTTTTACCTAATGTCGTGGAAGAGCAGACTTATGTTGAAGACTCTTGTAAATTACACGATATTGATGATGAACGCTTCAACGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATAGACAGTGACAATGGCAGTACAAGTTCAAGTTATAAGTACGTATGCTCATGGTGTTGGGAACCTGAAAATGGAAAAGATCCTAGGATGATCTTCTGTATAGATAGTGGAGAATTTTTTATGATTGAAATTCATTTTGATCCTGATGACCTTAATGTTAATCTCTCTGAGTGTCTCTACAAAGGTCTACCCTGTAAAGCACTTTTGTGGGTTGAAGGCGGATATCTGGCTGCTCTTGTAGAAATGGGAGATGGCATGCTCCTGAAATTGGTGGATGGAAGGCTTTGTCATTTAAACCCTATTCAAAACATTGCACCAATCTTGGATATGACAGTTGTGGATTATCACGATGAGAGGCATGATCAAATGTTTGCTTGCTGTGGCGTGGCACCTGAAGGTTCACTACGGATTATTCGGAGTGGCATCAGTGTAGAAAAGCTACTCAGGACTTCTCCTATATATCAAGGTGTAACTGGTACTTGGACAGTTCGAATGAAAGTTGCTGATTCATATCATTCTTTCCTAGTTCTGTCCTTTGTTGAGGAGACCAGGATATTGTCAGTTGGCTTAAGTTTTACTGACGTGACTGATTCCGTTGGTTTCCATCCTAATGTATGTACTTTGGCATGTGGTCTTGTGAGTGATGGTTTGCTTGTTCAGATCCACCAGTCTACTGTCAGGCTTTGTTTGCCTACGAAGGCTGCTCACCCTGAAGGTATCCCTTTGTCGTCTCCTATTTGCACATCTTGGTCCCCAGACAATGTGAATATCAGTTTAGGGGTGGTTGGGCATAACTTTGTTGTCGTATCAACATCTAACCCTTCCTTTTTGTTTATCCTTGGGGTTAGATTGCTATCAGCTTCTCATTATGAAATTTATGAAATGCAGCATTTGGAATTGCAGAATGAATTATCATGCATTTCCATCCCTAGACCAAAAAATGAGCAAAAACAAACACATTCATCCATTTCAGCAAATACTAGCTACATCTCCTCCTTTTTGAGTGGAGGGGACAACAATAAGACATTTATTATTGGCACACATAAGCCTTCTGTGGAAATTTGGTCTTTTGCATCTGATGGAGTTACTGTAGTTGCTCGTGGTACAATTTCATTAACAAATACTATGGGAACTGCTATAACTGGGTGTGTACCCCAAGATGTGCGTCTTGTATTTGTTGACAAGTATTATGTTGTAGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGCAGAACCATCTCCTTCATCACCACTAAATGTGGTGGGTACTGCTCCATCTTCTATAAATTTGGTAAATCATGTGACTAATGTTTTGGACAAGAGGAGTGACCTTCCTTCCACTCTTCAATTGATTGCCATTCGTCGCATCGGCATTACTCCAGTTTTCTTGGTGCCCCTGGGTGACACACTTGATGCTGATATAATTGCTCTGAGTGATAGACCTTGGTTGTTGCATACTGCAAGACACAGCCTTTCCTATACTTCTATCTCCTTTCAGCCATCCACACATGTGACTCCTGTTAGCTCTGTTGAGTGCCCAAAAGGAATATTATTTGTTGCAGAGAACAGTTTGCATCTTGTGGAGATGGTGCAGAGCAAGAGACTTAATGTGCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTATCACAATGAAAGCCGGATGTTGCTTGTAATGAGGACAGAACTCAATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCTTAAGTGGGTCAGTACTGTCATCTTTTAGACTTGAACTTGGAGAAACAGGAAAATCCATGGAATTAATAAGAGTTGGAAGTGAGCAGGTGCTTGTAGTTGGAACTAGTCTGTCTTCTGGTCCAGCCATAATGCCCAATGGTGAAGCTGAGAGCGCCAAGGGTCGTCTTCTTGTTCTCTGCCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATGACATTCTGTTCAAAAGCTGGGTCATCATCTCAAAGGACTTCACCATTCCATGAAATTGTTGCATATGCTCCTGAGCAGCTTTCAAGCAGCAGTCTTGGCAGCAGCCCTGATGACAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTTCGATTGGTTTATGCCACTACATGGCAGGGCATGGTACTTGCAATATGTCCTTATACTGATCATTACTTCTTGGCATCTGCTGGCAATGCTTTCTATGTATGTGGTTTCCCAAGTGACCATCCCCTAAGAGTAAGAAGGTTTGCTGTGGGAAGGACACGCTTCATGGTAACATCTTTGACTGCAGATTCTACTAGAATTGCAGTTGGTGATTGCCGTGATGGTATCCTTTTCTATTATTACCATGAGGAAGCAAGAAAGTTTGAGCAACTTTACTGTGACCCGTCACAGAGGTTAGTTGCTGATTGCATTCTTATGGATACTGAAACAGCAGTTGTTTCAGATCGCAAAGGAAGCATTGCTGTTTTATGTACAGAATATTTGGAAGACAGTGCAAGTCATGAAAGCAACTTGATACTAAGCTGTGGTTACTTCATGGCCGAGGTAGCCATGAGCATCCAAAAGGGCTCATATTCATACAGACTTCCAGCTGATGATGTTTTGCAAGGTGGCAATACTCCGAAGACAAATGTTGACTCGATGATAAATACGGAAAATACTATTATTGCTAGTACTCTGTTAGGAAGCATAATCATCTTCACCCCTTTATCAAGGGAAGAATATGAGCTTTTAGAAGCGGTGCAAGCAAGACTTGTTGCCCATCATCTGACAGCGCCTGTTCTTGGAAACGATCATAATGAGTTTCGTAGCCGTGAAAATCCAGTTGGAATGCCAAAGGTACTGGATGGTGACATGTTGACTCAGTTTTTGGAGCTAACAAATATCCAGCAACAGATGATTTTGTCTTCTTCAGAGCCACCAAAAACGGCAAAACCAAGCTCAAAGCCATTCCTACCTCCTCATATTTCTGTCAGCCAGGTAGTTCAACTTCTTGAAAGAGTTCATTATGCACTGAACTAG 4140 0.4205 MAVSEEECSSTKRGGGGGAARSFSSSSSARRYYLSKCVLRGSVVLQLLYGHIRSPTSNDVVFAKETSIELAVIGEDGNVHSVCDQPVFGTIKDLAILPWNDKFRARDPQMWGKDLLVALSDSGKLSLLTFCNEMHRFFPITHVELSNPGNPRDLPGRMLAIDSSGCFIAASAYEDRLVLFSMSTTGNDIIDERITYPSEVEGTAASGTSRSIQRTTIHGTIWSMCFISQNSRQPSKEHNPLLAVILNRKGSLLNELLLLEWNIKAHTIFVISMYVEAGPLAHDIVEVPNSCGLAFLFRAGDALLMDFRDPHNPCCVYRTSLNFLPNVVEEQTYVEDSCKLHDIDDERFNVAACALLELSDYDPMCIDSDNGSTSSSYKYVCSWCWEPENGKDPRMIFCIDSGEFFMIEIHFDPDDLNVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGMLLKLVDGRLCHLNPIQNIAPILDMTVVDYHDERHDQMFACCGVAPEGSLRIIRSGISVEKLLRTSPIYQGVTGTWTVRMKVADSYHSFLVLSFVEETRILSVGLSFTDVTDSVGFHPNVCTLACGLVSDGLLVQIHQSTVRLCLPTKAAHPEGIPLSSPICTSWSPDNVNISLGVVGHNFVVVSTSNPSFLFILGVRLLSASHYEIYEMQHLELQNELSCISIPRPKNEQKQTHSSISANTSYISSFLSGGDNNKTFIIGTHKPSVEIWSFASDGVTVVARGTISLTNTMGTAITGCVPQDVRLVFVDKYYVVAGLRNGMLLRFEWPAEPSPSSPLNVVGTAPSSINLVNHVTNVLDKRSDLPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHTARHSLSYTSISFQPSTHVTPVSSVECPKGILFVAENSLHLVEMVQSKRLNVQKFHLEGTPRKVLYHNESRMLLVMRTELNCGTCLSDICCVDPLSGSVLSSFRLELGETGKSMELIRVGSEQVLVVGTSLSSGPAIMPNGEAESAKGRLLVLCLDHVQNSDSGSMTFCSKAGSSSQRTSPFHEIVAYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLVYATTWQGMVLAICPYTDHYFLASAGNAFYVCGFPSDHPLRVRRFAVGRTRFMVTSLTADSTRIAVGDCRDGILFYYYHEEARKFEQLYCDPSQRLVADCILMDTETAVVSDRKGSIAVLCTEYLEDSASHESNLILSCGYFMAEVAMSIQKGSYSYRLPADDVLQGGNTPKTNVDSMINTENTIIASTLLGSIIIFTPLSREEYELLEAVQARLVAHHLTAPVLGNDHNEFRSRENPVGMPKVLDGDMLTQFLELTNIQQQMILSSSEPPKTAKPSSKPFLPPHISVSQVVQLLERVHYALN 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0225 1379 MobiDBLite consensus disorder prediction 1 24 - -
Lal20g0225 1379 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 114 674 IPR018846 -
Lal20g0225 1379 Pfam CPSF A subunit region 943 1331 IPR004871 GO:0003676|GO:0005634
Lal20g0225 1379 Gene3D - 507 903 IPR015943 GO:0005515
Lal20g0225 1379 Gene3D - 44 464 IPR015943 GO:0005515
Lal20g0225 1379 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 26 1376 - -
Lal20g0225 1379 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 26 1376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0225 Lal-Chr20 1572860 1584934 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0225 K12830 - gmx:100806799 2227.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0225 20 1572860 1584934 Lal20g0225 20 1572860 1584934 ECH