Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0215 ATGGAGCATGCAACAACAACAACAACCCCTCTATTAGAATTTACTCCTCCTTCAAAAAAAGCTTCAAAGCTTCAAACTTTAGGGAATATCATAGTCTCTGTAGTTGGAACCGGGGTTTTGGGGTTACCCTTTGCTTTTAGGGTAGCTGGATGGGTTGCTGGATCCCTTGGGTCTGAGGAGAGTATATGTACACACGATTTTATCCGGGAAGATAACAAACTTACCGTTGTGTTTTGGCTCATCCTCTGGTCTAAAGATTATTTAGATGATTCCATAACCAAAAGGACAGAAACTAAAAAGAAACTGAATTTTCGTCGTGGTCCAAAGAATATAGATTTGATACTACTACGTACTAGCAGTGTACCTTTCGTATTTGCTTCATCCGATGGTTGGTTGAGTAACGAAAAGGTTAGGTGCAAAGAGAAGTTGGCATCAGAAGAACCGTTAGTGGAATCAAGAACATATGGAGACCTGGGTAATCGGTGCTTTGGAACCCCAGGTCGTTATCTGGCAGAACTTTTAATTTCGGTAGCGCTATGCGGAGGATCTGTTGCGTATTTGGTATTTATTGGACAAAATCTTCATTCCGTTTTTCAATCCGATGGACTCTCATTAGCTTCCTACATATTTATGTTAGTACCTGTTGAAATTGGATTGTCATGGATAGGAAGCTTATCTGCTTTAGCACCTTTTAGCATTTTTGCTGATATTTGCAATGCCTTAGCTATGGGAATTGTAGTGAAAGAAGATATAGGGAAAGCCCTAGTGAGTGGTTTTTCATTTGAAGAAAGGACGACAATCACATCCAACATCGGTGGGTTGCCGTTTGCAGCAGGCATGGCAGTTTTTTGTTTTGAGGGGATTGGAATGACACTGGCCTTAGAGAATTCTATGCAGGATAGAGCCAAGTTCCCAAAATTGCTGGCTCAAACTTTTGGTGGGATAACTTTTGTGTACATTCTTTTTGGGTTCTGTGGTTACATTGCATTTGGTGAAGAAACTAGAGACATCGTGACCCTCAATCTTCCTAGAAATTGGTCATCTATTGCGGTACAGGTAGGGTTATGCTTAGGGCTTGCATTCACATTCCCAGTGATGATACACCCATTTAATGAGATTATGGAAGGGAAATTCAATTTTGTTGACATGGGCAATAATAATGAACCGACAAGAATGAGAAAGATTTCGATATACATGAGTCGCGCTGTCGTGGTGGTTGTGCTAGCAATCTTAGCTTCATTTGTTCCGGAATTTGGTGTGTTTGCTTCATTTGTAGGGAGCACTATATGTGCAGTGATCTCATTTGTTTTGCCAGCTACATTTCACATAAAACTATTTGGCTCTTCTCTAAGCATATGGGAAAAATTCTTGGACTCTTTTGTGCTACTGTGTGGATTATTTTTTGCTGTTTATGGCACTTACAATACAATAGTTGGAGTTTGA 1443 0.4019 MEHATTTTTPLLEFTPPSKKASKLQTLGNIIVSVVGTGVLGLPFAFRVAGWVAGSLGSEESICTHDFIREDNKLTVVFWLILWSKDYLDDSITKRTETKKKLNFRRGPKNIDLILLRTSSVPFVFASSDGWLSNEKVRCKEKLASEEPLVESRTYGDLGNRCFGTPGRYLAELLISVALCGGSVAYLVFIGQNLHSVFQSDGLSLASYIFMLVPVEIGLSWIGSLSALAPFSIFADICNALAMGIVVKEDIGKALVSGFSFEERTTITSNIGGLPFAAGMAVFCFEGIGMTLALENSMQDRAKFPKLLAQTFGGITFVYILFGFCGYIAFGEETRDIVTLNLPRNWSSIAVQVGLCLGLAFTFPVMIHPFNEIMEGKFNFVDMGNNNEPTRMRKISIYMSRAVVVVVLAILASFVPEFGVFASFVGSTICAVISFVLPATFHIKLFGSSLSIWEKFLDSFVLLCGLFFAVYGTYNTIVGV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0215 480 PANTHER BNAA05G27230D PROTEIN 137 479 - -
Lal20g0215 480 PANTHER BNAA05G27230D PROTEIN 8 57 - -
Lal20g0215 480 PANTHER AMINO ACID TRANSPORTER 8 57 - -
Lal20g0215 480 PANTHER AMINO ACID TRANSPORTER 137 479 - -
Lal20g0215 480 Pfam Transmembrane amino acid transporter protein 20 56 IPR013057 -
Lal20g0215 480 Pfam Transmembrane amino acid transporter protein 138 477 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0215 Lal-Chr20 1518303 1521526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0215 4 57 Organic Solute Cotransporters AT3G11900 63.934 4.14e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0215 K14209 - gmx:100305659 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1296 11 16639506 16642332 Lal20g0215 20 1518303 1521526 LSH