Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0214 ATGAATGTACATTCTCATCTAATGGTGAAAACAAAACAGAAGCTCACAGGAAAACTTCCTGATGAAAAAAGTGTTGCTTCAGATCACCTTATTAACTCGCCAGAAAGTGATATTCAGCATGGGGATAACAGTGATTGGGTTATAGTGAAAAAACAGAGAGTCACGATTCTGGTGCCTCCTGCACCTCATAGTGAAAGATCCTTAACCGAAAACCAAGGACCAACTGACCTGCATCTTATGGCTCCTGATATAGCCAATAGCCTTGAGAAACTTCCCAAGGAAACGTCTACTGTACATCCTTCAGGTAATGAACATGAGAAAACCAATTTATTGGCTCCCCAAAAGGAGATTCAGGCCGTAAAACGAGGCCCCCTTCCCTTAGCTAAATTAACTGTAGCCAAGCCAGTAAGGATAGATCAAAGAATGGAGTCAGAAAATCTGCAGCAAGCAAGTATTTTGAAGTCACATAACTTACTTGGAGTATATGAAGCTTCCAAAGGTATTAAGCAGCCCAGAAAATTACTTGCAACAAGAAGATCCCTCAACTTGGTAACTTCATTAAATCAAGGGCTAAGAGCATCAAATCTTGAGAGGAAGCTTGAGAGAGCCGGTGGCTTGAGCAAGTGGCTAACATCACTTGGACTGGAGCAGTTTGTGAGAATTTTTCAGGGGAGGAGTCTCAATAAGTATTACCTGGCAAATCTAACCATGAAAAAACTCAAGGATATGGGTGCAAGTGCGGTGGGACCTCGCAGGAAATTGATCCATGCCATTGAATGTGTTTGCCAACCATATTGTTTCCAGGCATTGTAG 813 0.4207 MNVHSHLMVKTKQKLTGKLPDEKSVASDHLINSPESDIQHGDNSDWVIVKKQRVTILVPPAPHSERSLTENQGPTDLHLMAPDIANSLEKLPKETSTVHPSGNEHEKTNLLAPQKEIQAVKRGPLPLAKLTVAKPVRIDQRMESENLQQASILKSHNLLGVYEASKGIKQPRKLLATRRSLNLVTSLNQGLRASNLERKLERAGGLSKWLTSLGLEQFVRIFQGRSLNKYYLANLTMKKLKDMGASAVGPRRKLIHAIECVCQPYCFQAL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0214 270 Pfam SAM domain (Sterile alpha motif) 206 260 IPR001660 GO:0005515
Lal20g0214 270 SUPERFAMILY SAM/Pointed domain 205 263 IPR013761 -
Lal20g0214 270 PANTHER SCP160 9 269 - -
Lal20g0214 270 MobiDBLite consensus disorder prediction 1 22 - -
Lal20g0214 270 ProSiteProfiles SAM domain profile. 206 264 IPR001660 GO:0005515
Lal20g0214 270 PANTHER F26K24.15 PROTEIN-RELATED 9 269 - -
Lal20g0214 270 SMART SAM_4 198 264 IPR001660 GO:0005515
Lal20g0214 270 Gene3D - 196 263 IPR013761 -
Lal20g0214 270 CDD SAM_superfamily 206 260 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0214 - - gmx:100804141 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0214 20 1513114 1517016 Lal20g0214 20 1513114 1517016 ECH