Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0210 ATGGCGAGAGTAGCTATAGAGACTTCAGTTCACCATAGCTCTCGTCGAATTGGATTAGGGCTTCCGAAAGGTGGTGGTGGTGGAGGATCTATGGTTAAGCTTAAAAGAAAGACACCATCTCAACTTAGGGGAGAGCAGTTGAAACGGGCAAGTGTTGTGGATCATACTGATGAATCCCCATTCACTTTGGACGGTTCTAGTTCTAATAATACTACCAAATTGGATAATGGGTTTAAAAAGCCAGGATTGTCAGGGACCCTGAGATACACTGGCACACATGTTGATGATATATTTCCTGCCAAAAAGTCCAGGTTTAAGATTGTGTCTGGAAAGGAAAATGCAAAGGAAAATGCATTCTTAGAGAAAAGTAGTATCCTGAAAAACCTTTCAGCATTTGCGAATTCAGAGACCACAAGACAGCAAGGAATTTCATGCTTGAAGAACTCTGTTGCTTCAATTGAAGTTAGCAAAGGTGGTGTATTGCAAGCTTGTCAAACAACCGAAAAATGCAGCCAAGGGAAGTTTCTTAGTGTTTCTGAACTTTCATCAGCTGCTGATAGATCTTCTGGCTTGGCAGCTCCTGTTGACATGGGCAAAACATTAAGAGGACTATTTGCTCTTGATTCAAATGCTGATAATGGTTTAGCTGCCGAATCATCTGAAAAATGTGGAGATTTGTCATCAGCCTTCACAGGAAATTTCTTCTCTGAATGTCATGTACCTAGCCAGAAGGCTCCTTTGGATCTTACTCTAAAAACCAGTATGCGGGTAGTTTGCTCGTCTTCTGTGAATTGGATCCATAGGTCAGTTCTGAGTGGTACCATGCCTTTTGAGAGTCAAAATATGAGAGTTTCCCAGGGTTTTAACGGTTTGCATTCATGGATATATCCACAATCTGTTCTACCACCTTCTCTCATATCAGTCTTGAGCTCTTCAGCAGTAGATGGAGAATCGGAGTTTTTAAGGAAACGACATGTTGATTGGGAAGAATCTTTCCGGAATCTTTATTACATGCTTCGTAAGAACATTTGTCGTCTCTTTTATGTTTGCACTTCCCAGTTTGTGGTGATGTTCACTGGCAGTGACACGTCTAGAAGAGCCAAATGTTCATGTAATGCTTATATATCTAAGTCAACCAGAGGTTTGAGATCGTTGTTGAGAGAGCATGATGTTAGTTTCTCAATGCCTCTCTGCCATTCGAAAGTGGAGCAAGTCACTACTGAGGATCTTGCTGAACTATCAGAGATAGAGAATCAAAACTTGGGGCAGACTCGACGATTAAAGTCATTCTCTGATGTTGATAATAGCCCAGAATCTTTGCTGGTTTTCAGTGGCAACGACAATGTACATGGTTTATATGATGTTTTACTAAATTACAGATCAATCTTGACCTCACTGTCTGGTATGGATGTACCTGTCTTGTGCTCTCCTTTGCCCTTTCAAAATTCTGCTTCATCATCTCCTAATATTAAATGCATGGAGATGAGAAGAGCTGAACATATTGCTGCTTCTTCTAATGGATCTATTGGGAAAGATAGTGAGCCTGCACAAGGATTGCTAGATGGCCTTTGTTGTAGCATTGAAATTAATGATGCATTTCTTCCACCTTGGATTATTAGTGGTATATGTGGATTGATGGGATCAGAAGGAAGAAGCTTCGAGGCAAGCTGTCTCAAACAATTGGGCTTAAGGTTAAGACTAGCTCCATATGACCTTGTTGCAGCACAAGCTGCACATGGAAGCTCAATGCAGGCCCAGTCTCCTCTAGAGCCAGTGGTGGAACTGATAATATGGATCTATAGCTTATGGGTGGATCTCTGTTTTGTGACGGAACCTAATTCACTTGGCTTGAATGTTGCTTTAAAATCAACTTGTGACAAGTCAGAATCTAAAGCAGGAGGAAGTGAAAACATGGCAAACTCTAGTGGTACATTTGGAATTTCAGAATCTATAGCCATCTCTAGCCTGCAGTCTTGTTCACTAAAAGGTTTGAAGTACAATGATGGATCTTATACAGCTACTCTATCTCCTGTAACTTATTTTCATCACATTGATGATTAA 2061 0.4081 MARVAIETSVHHSSRRIGLGLPKGGGGGGSMVKLKRKTPSQLRGEQLKRASVVDHTDESPFTLDGSSSNNTTKLDNGFKKPGLSGTLRYTGTHVDDIFPAKKSRFKIVSGKENAKENAFLEKSSILKNLSAFANSETTRQQGISCLKNSVASIEVSKGGVLQACQTTEKCSQGKFLSVSELSSAADRSSGLAAPVDMGKTLRGLFALDSNADNGLAAESSEKCGDLSSAFTGNFFSECHVPSQKAPLDLTLKTSMRVVCSSSVNWIHRSVLSGTMPFESQNMRVSQGFNGLHSWIYPQSVLPPSLISVLSSSAVDGESEFLRKRHVDWEESFRNLYYMLRKNICRLFYVCTSQFVVMFTGSDTSRRAKCSCNAYISKSTRGLRSLLREHDVSFSMPLCHSKVEQVTTEDLAELSEIENQNLGQTRRLKSFSDVDNSPESLLVFSGNDNVHGLYDVLLNYRSILTSLSGMDVPVLCSPLPFQNSASSSPNIKCMEMRRAEHIAASSNGSIGKDSEPAQGLLDGLCCSIEINDAFLPPWIISGICGLMGSEGRSFEASCLKQLGLRLRLAPYDLVAAQAAHGSSMQAQSPLEPVVELIIWIYSLWVDLCFVTEPNSLGLNVALKSTCDKSESKAGGSENMANSSGTFGISESIAISSLQSCSLKGLKYNDGSYTATLSPVTYFHHIDD 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0210 686 MobiDBLite consensus disorder prediction 60 77 - -
Lal20g0210 686 PANTHER DOWNSTREAM NEIGHBOR OF SON 32 672 IPR024861 -
Lal20g0210 686 MobiDBLite consensus disorder prediction 38 55 - -
Lal20g0210 686 MobiDBLite consensus disorder prediction 1 77 - -
Lal20g0210 686 PRINTS Downstream neighbour of Son (DONSON) protein signature 245 257 IPR024861 -
Lal20g0210 686 PRINTS Downstream neighbour of Son (DONSON) protein signature 331 344 IPR024861 -
Lal20g0210 686 PRINTS Downstream neighbour of Son (DONSON) protein signature 344 359 IPR024861 -
Lal20g0210 686 PANTHER PROTEIN DOWNSTREAM NEIGHBOR OF SON 32 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0210 Lal-Chr20 1492496 1499414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0210 K22422 - gmx:100796531 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1719 1 19612099 19626638 Lal20g0210 20 1492496 1499414 LSH