Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0205 ATGGAAACTGAAAATGGGGTTGTTGTGGAGGAAGAGAAACGTGTTATTGGAGTAACAACAATTGAGGAGAGTGCAAAGAAAGAAATTGAAAATGATTGTAATGGTGCAGAAATTGAGACTAAGATTGAAGTATCAAAACCCATATTGGAGGGTGATACCATCAATTCTGCTGTTAACACTGTTCTAGTTGAAGCCTCTGTAACTTCTTCTGCAAGTAAAAATTCAAAACGTGCCAAGGAAGCTGGTGTTAGAGCTGGTTTTGCTTCAAAGAACAACAAAAATGCCAAAGATAAACCTATTTTGAAGGGTACAACACAAATATCTCAAAAACAAAGGCCAACCCTCTCTCAGAGCCTCTCTTTCCCAGCAAAATCAGCGCGCGGAGATGGCATGCGCAAAAGCATTGATGGACATAATCTAGTGAAGGCAAAAGTTAAGCATGTTCTAGATAATGGTACTAAAGTTGAGGCTTCAATTCATCATTCAAACAAGTCCATAAACTCAGAAGTGAACTCAAAGGAAGCAAAATTCAACACAAGAGGCTCTAAGTCTAACCACAACACTTCTTTGACATCCATGCCTAGTTTTAAACGCTCTGTGTCTGTGTTTGGAAGGTCTACTCCAGTGAATGTAGTTACCAAGAACCATCCATCCGAGGCTTCACTACCCCCTGATCAGATTTCTAGTCCAGCAAAAACTACAGAACCAAATAAAGAGGATGAAGATATTGAATCCACAACTTTAAGTGCTACTCCATCTCAGAGGAACAGTGGTTCTGGATTTTCCTTCAGATTGGAAGAAAGAGCTGAAAAAAGGAAAGAGTTTTTCTCAAAGTTAGAAGACAAAATTCAAGCAAAGGAAGCAGAGAAAACTAACCTCCAAGCAAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGAAATTGAGGAAGACCATGACATTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCACCTACTAAAGTTGAACTGAAGAAGATACCAACAACTCGCCCAAAATCCCCAAAGCTTGGAAGGAACAAAGGATCTGCTATGAACAACATTTCAGAAGAAGATAAATCTTGTTCCAGCCCACATGGAAAAAACCATCAGAATGACTCAACCAAGGCTTTAAAAGTAAAGGGTCATAATCATAAAGATGTGATTTCAAAGAAACAGATAAAAAAATCTCAAACAATTCTGCACTCTGAGGAAACTGCAACAAATAAAAGTGAAGGTGACTCTATGAAGAATGTTGCAGTAATGAACCAAGATGCAGAAGCATTCACAGGAAGCAATGAAGAATACCCAAATGAACATGTTAACAGTTCAAATGACATAGAGCTAGAATGTGAAACAGAACTTCCCACGAGTGATGCAATACTATTGAATCTGACTACACCTGACCTTGTATCTTATGAGGTTACTGTTGGAGTGTAG 1443 0.3874 METENGVVVEEEKRVIGVTTIEESAKKEIENDCNGAEIETKIEVSKPILEGDTINSAVNTVLVEASVTSSASKNSKRAKEAGVRAGFASKNNKNAKDKPILKGTTQISQKQRPTLSQSLSFPAKSARGDGMRKSIDGHNLVKAKVKHVLDNGTKVEASIHHSNKSINSEVNSKEAKFNTRGSKSNHNTSLTSMPSFKRSVSVFGRSTPVNVVTKNHPSEASLPPDQISSPAKTTEPNKEDEDIESTTLSATPSQRNSGSGFSFRLEERAEKRKEFFSKLEDKIQAKEAEKTNLQAKSKENQEAEIKKLRKTMTFKATPMPSFYKEPPTKVELKKIPTTRPKSPKLGRNKGSAMNNISEEDKSCSSPHGKNHQNDSTKALKVKGHNHKDVISKKQIKKSQTILHSEETATNKSEGDSMKNVAVMNQDAEAFTGSNEEYPNEHVNSSNDIELECETELPTSDAILLNLTTPDLVSYEVTVGV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0205 480 MobiDBLite consensus disorder prediction 157 233 - -
Lal20g0205 480 MobiDBLite consensus disorder prediction 157 265 - -
Lal20g0205 480 MobiDBLite consensus disorder prediction 401 417 - -
Lal20g0205 480 MobiDBLite consensus disorder prediction 98 123 - -
Lal20g0205 480 MobiDBLite consensus disorder prediction 67 137 - -
Lal20g0205 480 Coils Coil 276 306 - -
Lal20g0205 480 ProSitePatterns Transcription termination factor nusG signature. 202 211 IPR015869 -
Lal20g0205 480 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 480 - -
Lal20g0205 480 MobiDBLite consensus disorder prediction 362 385 - -
Lal20g0205 480 MobiDBLite consensus disorder prediction 317 417 - -
Lal20g0205 480 MobiDBLite consensus disorder prediction 246 261 - -
Lal20g0205 480 Pfam Targeting protein for Xklp2 (TPX2) domain 261 329 IPR027329 -
Lal20g0205 480 PANTHER PROTEIN WVD2-LIKE 4 1 480 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0205 Lal-Chr20 1454351 1458985 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0205 - - lang:109348278 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1289 11 16546933 16551228 Lal20g0205 20 1454351 1458985 LSH