Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0179 ATGGCAATTGGCCTTAAATTTTCAATTATAATATTTTCTTTATTTTCTATGATAGACTTTACCTTTACTTTTTCCCATACCAAACCACAACCAAGGTTTCCTTCTTCACCACTTCATCCAGAGCTACAACTAAGTTCTGCTTCTGATGAAAAAAACCTTTACAAAACAAAGTATTTCACCCAAATACTTGATCACTTCAATTATAATCCCCAGAGCTACCAAACTTTTCAGCAGAGATATCTCATCAATGATACATATTGGGGTGGTTTCAAGAACAATGCTCCAATCTTTGTATACACAGGAAATGAGGGTGACATTGAATGGTTCACACAGAACACAGGCTTTATGTTTGAAAAAGCACCTCATTTCAAAGCACTTTTGGTTTTTATTGAGCATAGATACTATGGAAAATCAATACCATTTGATGGAGACAAGAACATTGCATATGCAAATAGCAGCACACTTGGATATCTGAGTTCAACACAAGCATTGGCTGATTATGCCACTCTCATTATTGATCTCAAGAAGAATTTGTCAGCAACTGACTCTCCTGTAGTAGTATTTGGAGGATCCTATGGAGGAATGCTTGCAGCATGGTTTAGATTGAAGTATCCACATGTTGCCATTGGAGCATTGGCATCTTCTGCTCCAATCCTCCATTTTATGGATGTGACATCACCATATGTCTTCAACAATATTATCACACAAGATTTCAGGAGCGTGAGTGAGAATTGTTACAAAGTACTAAAGGGGTCGTGGAAGCTAATAGAGGACACATTTAGCAAAAAAGGAGGACCTAAACTGCTACAAAAAACATTCAGAATATGCAATAATGACTATGACCCAGATTCTCTGGAAGGTTGGCTTCAGACGGCGTGGATTTATGCAGCAATGACAGATTATCCAACACCATCTAATTTCTTGAATCCTATGCCAGCCTACCCAGTGAGAAAGATGTGCGAGGCAATTGACAGGTCAAGCACATGGAATAATAATAATAATAATACATTAGACAAGTTGTATGGTGCAGCAAATATCTATTACAACTACACTGGCACTGTCAAGTGTTTTGATTTGAACGATGATTCAGATCCTCATGGTCTCCAAGAATGGCAGTGGCAGGCATGTACGGAGATGATAATGCCCTTAGGCAGTAACAATAAGGAGAGCATATTCCCAGAATCAAAGTGGTATTATGATGATAGATCTTCTTATTGCCAATATGCCTACAATGTAACTCCAAGACCCCATTGGATTACAACTGAGTTTGGTGGCCATGATATTAAGAAAGTTCTAAGAAGATTTGCAAGCAACATTATCTTTTTTAATGGTTTAAGAGACCCTTGGAGCGGTGGAGGGGTGTTGGAGAATATATCAAAAACAATAGTTGCAATAGTTGCAAAAGAAGGAGCTCATCATGTGGACCTAAGGTTCTCAACTAAGGAAGACCCAAAGTGGCTTAAAGATATTAGGAAACAAGAGGTAAAAATCATAGCAAGTTGGATCAAACAATATCATGAAGACCTAAAGTTCAATAATTGA 1542 0.3774 MAIGLKFSIIIFSLFSMIDFTFTFSHTKPQPRFPSSPLHPELQLSSASDEKNLYKTKYFTQILDHFNYNPQSYQTFQQRYLINDTYWGGFKNNAPIFVYTGNEGDIEWFTQNTGFMFEKAPHFKALLVFIEHRYYGKSIPFDGDKNIAYANSSTLGYLSSTQALADYATLIIDLKKNLSATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILHFMDVTSPYVFNNIITQDFRSVSENCYKVLKGSWKLIEDTFSKKGGPKLLQKTFRICNNDYDPDSLEGWLQTAWIYAAMTDYPTPSNFLNPMPAYPVRKMCEAIDRSSTWNNNNNNTLDKLYGAANIYYNYTGTVKCFDLNDDSDPHGLQEWQWQACTEMIMPLGSNNKESIFPESKWYYDDRSSYCQYAYNVTPRPHWITTEFGGHDIKKVLRRFASNIIFFNGLRDPWSGGGVLENISKTIVAIVAKEGAHHVDLRFSTKEDPKWLKDIRKQEVKIIASWIKQYHEDLKFNN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0179 513 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 2 509 - -
Lal20g0179 513 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 2 509 - -
Lal20g0179 513 Pfam Serine carboxypeptidase S28 61 492 IPR008758 GO:0006508|GO:0008236
Lal20g0179 513 SUPERFAMILY alpha/beta-Hydrolases 124 476 IPR029058 -
Lal20g0179 513 Gene3D Serine carboxypeptidase S28, SKS domain 226 396 IPR042269 -
Lal20g0179 513 Gene3D alpha/beta hydrolase 58 502 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0179 Lal-Chr20 1257938 1263548 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0179 K01285 - gmx:100781698 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0179 20 1257938 1263548 Lal20g0179 20 1257938 1263548 ECH