Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0167 ATGGCTAACAAAGAGTTCAAAGTCCCGCCGGTGTCTTTCCCCGCCGGAATCCCCGCTCCCAACCTCCCCCAGCGCCGCGTTCCAAACCCTCCCTTCCAACCTAACTCCAGCATCCCCTTTATGTCCTTCGACATCGGCTCCGCCGCAGCTTCCACCTCCTCCGGTCCAATTTACACCGGTCACATCGGCAGCGGCGGCTCCGCCAACTTCGAGGACGAGGAGCCTCTCCTCGACGAGCTCGGCATCCACCCGGACCAAATCTGGAGTAAAATCCGTTCCGTACTGAACCCGTTTCGCGTGAACCACACGATCCACAAAGATTCCGATCTCTCAGGTCCGATCCTTCTGTACATGTCCTTTTGTCTCTTTCAGTTACTCGCTGGGAAGATCCAATTCGGCGTTATATTAGGTTGGATCGTTGTTTCTTCGATCTTCTTATATGTCGTTTTCAACATGCTTGCTGGTCGAACTGGAAATCTTGATCTGCATACTTGTACTAGTGTGGTTGGTTATTGTATGTTGCCGGTTGTTATTTTTTCGGCTCTTTCGCTTTTTGTGCCGCAGGGTGGGGTTGTTGCGGTTGCTATTGCTGCTGTTTTTGTGCTGTGGTCGACTCGGGCTTCGACTGGGCTCATTGTGTCGCTGACTGATGGCGGGGATGAGCATCGTGGGTTGGTTGCGTATGCGTGTTTCTTGATTTACTCTCTGTTTTCATTGCTTGTTGTGTTCTAA 732 0.5191 MANKEFKVPPVSFPAGIPAPNLPQRRVPNPPFQPNSSIPFMSFDIGSAAASTSSGPIYTGHIGSGGSANFEDEEPLLDELGIHPDQIWSKIRSVLNPFRVNHTIHKDSDLSGPILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCMLPVVIFSALSLFVPQGGVVAVAIAAVFVLWSTRASTGLIVSLTDGGDEHRGLVAYACFLIYSLFSLLVVF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0167 243 MobiDBLite consensus disorder prediction 1 24 - -
Lal20g0167 243 Pfam Yip1 domain 96 239 IPR006977 GO:0016020
Lal20g0167 243 PANTHER GOLGI MEMBRANE PROTEIN YIP1 4 243 IPR045231 GO:0006888
Lal20g0167 243 PANTHER PROTEIN YIPF 4 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0167 Lal-Chr20 1153974 1154705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0167 K20363 - gmx:100791279 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0167 20 1153974 1154705 Lal20g0167 20 1153974 1154705 ECH
Lal1g1764 1 19990868 19991981 Lal20g0167 20 1153974 1154705 LSH