Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0156 ATGGGTGTTCATATGCGTGTTCCAGGAATCATTTCCTTGCTCTGTCTAGTTTCTTGGTTATTCGAATTCAATGTTGTTTATTCCTACACTCTCCCTCCTCGTGGTAACAAAATCATCACCCCACAGAACAATGAAATTGATCCCACATCCCCACAACAGGTACGTATATCTCAAGTAGGACAGAATAGAATGAGAATATCATGGTTTACAATAATTCCAACCCCTGCAACAGTTCAATATGGTCTAACCCCTTCAGCTGATAGCTTTAATGCTACTGGAGTAACTGATTCATATCGTTATATGACTTTTTACTCTGGTCCGGTTCACAATGTGGTAATAGGTCCACTCAACCCTAATACAATTTACTACTATCGTATGGGTGACTCTACTAAAATATACACTATGAAGACTCCACCTTCTCAATTTCCTATCAAGTTTGCAGTTGTTGGAGATCTTGGACAAACAGAGTATACCAAAACAACTTTGGAGCATATATTCAAACCAGGCTATGACATGTTGCTATTAGCAGGGGACTTATCTTATGCAGATACCATTCAAGAACAATGGGAATCATTTGGTCGTCTAATTGAACCATTAGCTAGTCAGAGACCATGGATGGTAACAACAGGTGACCATGATGTTGAGAAGATTACAATTGTTCATAGAAAGTCATTCACAGCTTACAATACAAGGTGGCTAATGCCATTTGAAGAGAGTGGATCAAACTCTAACCAATACTATTCTTTTGAGGTGGCTGGTGTTCATGTTATTATGTTAGGATCATACACGGATTTTGACAGTAAGTCTGATCAATATAAATGGCTTCAAGGGGACTTGAATAAGTTGGATAGGGGAAAGACTCCTTGGGTTGTGGTGATGTTTCATGCCCCCTGGTATAACTCCAACAGTCTTCATCAGGGTGAATATGAATCAGTTGAAATGAAGGCTAGTATGGAAGATTTGCTATATAAAGCTCGTGTTGATCTTGTTATTTCAGCGCATATTCATGCCTATGAGCGTTTTACAAGGGTTTATAAAGAAAAAGCTGACAAGTGTGGTCCAGTGTATATTACTATTGGTGATGGAGGCAACCGTGACCAGTATAATCCATACTTTGCAGACCCCCCGCCAGATATATCATTATTCAGGGAGCGTAGCTATGGACATGGGACATTAGAGGTGGCTAATACAACACATGCACTTTGGACTTGGATTAGGAATAATGATGATAAACCAGTTATTAGTGAGTCTCTATGGTTCACAACCCTCTCATCAGATTCTGCTTGTAAAGCTTCATATTTATGA 1305 0.3931 MGVHMRVPGIISLLCLVSWLFEFNVVYSYTLPPRGNKIITPQNNEIDPTSPQQVRISQVGQNRMRISWFTIIPTPATVQYGLTPSADSFNATGVTDSYRYMTFYSGPVHNVVIGPLNPNTIYYYRMGDSTKIYTMKTPPSQFPIKFAVVGDLGQTEYTKTTLEHIFKPGYDMLLLAGDLSYADTIQEQWESFGRLIEPLASQRPWMVTTGDHDVEKITIVHRKSFTAYNTRWLMPFEESGSNSNQYYSFEVAGVHVIMLGSYTDFDSKSDQYKWLQGDLNKLDRGKTPWVVVMFHAPWYNSNSLHQGEYESVEMKASMEDLLYKARVDLVISAHIHAYERFTRVYKEKADKCGPVYITIGDGGNRDQYNPYFADPPPDISLFRERSYGHGTLEVANTTHALWTWIRNNDDKPVISESLWFTTLSSDSACKASYL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0156 434 Gene3D - 141 429 IPR029052 -
Lal20g0156 434 Pfam Purple acid Phosphatase, N-terminal domain 51 136 IPR015914 GO:0003993|GO:0046872
Lal20g0156 434 Gene3D - 50 140 - -
Lal20g0156 434 Pfam Calcineurin-like phosphoesterase 145 338 IPR004843 GO:0016787
Lal20g0156 434 Pfam Iron/zinc purple acid phosphatase-like protein C 353 410 IPR025733 -
Lal20g0156 434 SUPERFAMILY Purple acid phosphatase, N-terminal domain 46 139 IPR008963 GO:0003993|GO:0046872
Lal20g0156 434 CDD MPP_PAPs 140 421 IPR041792 -
Lal20g0156 434 PANTHER PURPLE ACID PHOSPHATASE 17 430 - -
Lal20g0156 434 SUPERFAMILY Metallo-dependent phosphatases 143 416 IPR029052 -
Lal20g0156 434 PANTHER ACID PHOSPHATASE RELATED 17 430 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0156 Lal-Chr20 1088129 1093004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0156 106 411 Miscellaneous Gene Families AT1G13900 27.322 1.41e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0156 K22390 - gmx:100794764 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0156 20 1088129 1093004 Lal20g0156 20 1088129 1093004 ECH
Lal1g1765 1 19999836 20004653 Lal20g0156 20 1088129 1093004 LSH