Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0134 ATGTCTACAACTCATTACTTCCAAATTCTACTCATTCTCCATCTCTCCTTCCCAATTAATTTCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCACCCCACAACACCTTCATAGAGGTTTCTCCTCATCTCCATTCTCCAAAACTACATCGTTTCAACCCTTCCTCATCGACCCCACCGGCAACTTCTCTCTAGGTTTCCTCCGCCAAAACCACAACCACCTCGTACTAGCCATCATCCACGTGGCATCCTCTGAGCCCTTCTGGTTCGCCAACCCAACCCACCTTGCATCATGGTCCGACACTACCCACGTCTCCTTCAACGGCAGCCTTGTACTCTCCGACCCCACTACCAACCTGTTCTGGTCCACCGCCACCAACGGCGGCGACACCCTCCTCCTCCTTAACACCTCCAACTTAGTAATAATCACTCAACCAAATGGGACCCACTTATGGCAAAGTTTTGATATTCCCACAAATACCCTCGTCCAAGATCAGAACTTTACAACCACCATGGCTCTAATTTCACCTAACGGTTTATATTCGTTACGGTTAGGTAATAACTTCATGAGTTTATACGCAAACCACGCTGTGAAGAGTGGGAAACCTTTGAAGCAATTAATGTATTGGAAGAGAACTGCACTACAAACCAAAGCAGAGATTCAACAAGGTCAAGGACCGATTTATGCACGAGTCAACTCTGCTGGTTATCTCGGAATGTATCAAACGAGTTCAAAACCGGTTGATGTTCAGAAATTCAACACTTTTCAGCAAACGTCGTCGTTTTTAATGGTCCGGGTTGAACCGGATGGGAACCTTAGAGGGTATTATTGGAGCGGGTTTAGTTGGGTTCTTAATTATGAAGCTATAAGTGAGACTTGTAATCTTCCTAGCCCATGTGGTTCGTACGGTTTATGCATCCCGGGTGGGTCTGGGTGTGAGTGTTTAGATAACCGAACCCGGTTCAAACCGGGTGGTTGTTTTGGTGGTAATAATGATGATAACGATAACGATAACGAGTACTTGTGTATGAAAGGGATTAGTTCAAGAAATAGTTATTTTGTGTTGAGAAGGAGTGGTGTAGAGCCACCAAATAAAGAGTTACTTGGGTATTTAACGACGTCGTCTTTAGAAGAGTGTGAGAGTTTGTGTGAGAAGAATTGTAGTTGTTGGGGAGCATTGTATAATAATGGAACCGGGTTTTGTTATGTTTTGGATCACCCGGTTCAGACGATGCTGAGAACCGGGGATGGGTCCAAGGTGGGTTATTTTAAAGTGAGGAAAAGTAAAGAGGAAAAGAATCGGGTGCAGATCAAGGTTGCGGTTGTAGTTACGGTTGGTGTTATTATCGGTGGGATTTGGATTTGGATTTGGATTTGGATGAGATGGAAAAGGAGAAAAGGGGTATTGAAGGAGGAAAATGGGGCTTCACCTGGCCCATATAAGAATCTCGAGTCTGCAAGTTTTAGATCCATTGAAATGTGCAATGGCCAATAA 1497 0.4429 MSTTHYFQILLILHLSFPINFTSSSSSSSSSSTPQHLHRGFSSSPFSKTTSFQPFLIDPTGNFSLGFLRQNHNHLVLAIIHVASSEPFWFANPTHLASWSDTTHVSFNGSLVLSDPTTNLFWSTATNGGDTLLLLNTSNLVIITQPNGTHLWQSFDIPTNTLVQDQNFTTTMALISPNGLYSLRLGNNFMSLYANHAVKSGKPLKQLMYWKRTALQTKAEIQQGQGPIYARVNSAGYLGMYQTSSKPVDVQKFNTFQQTSSFLMVRVEPDGNLRGYYWSGFSWVLNYEAISETCNLPSPCGSYGLCIPGGSGCECLDNRTRFKPGGCFGGNNDDNDNDNEYLCMKGISSRNSYFVLRRSGVEPPNKELLGYLTTSSLEECESLCEKNCSCWGALYNNGTGFCYVLDHPVQTMLRTGDGSKVGYFKVRKSKEEKNRVQIKVAVVVTVGVIIGGIWIWIWIWMRWKRRKGVLKEENGASPGPYKNLESASFRSIEMCNGQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0134 498 PANTHER OS11G0149900 PROTEIN 42 486 - -
Lal20g0134 498 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 281 IPR036426 -
Lal20g0134 498 Pfam PAN domain 373 411 IPR003609 -
Lal20g0134 498 Pfam D-mannose binding lectin 89 170 IPR001480 -
Lal20g0134 498 SMART ntp_6 348 429 IPR003609 -
Lal20g0134 498 PANTHER - 42 486 - -
Lal20g0134 498 ProSiteProfiles PAN/Apple domain profile. 343 428 IPR003609 -
Lal20g0134 498 PIRSF SLG 1 442 IPR035446 -
Lal20g0134 498 Gene3D - 47 156 IPR036426 -
Lal20g0134 498 SUPERFAMILY Hairpin loop containing domain-like 365 410 - -
Lal20g0134 498 ProSiteProfiles Bulb-type lectin domain profile. 41 155 IPR001480 -
Lal20g0134 498 SMART blect_4 48 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0134 Lal-Chr20 891710 893206 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0134 - - cam:101498584 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0134 20 891710 893206 Lal20g0134 20 891710 893206 ECH