Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0128 ATGGGAAGAAAAGGGCGAAGACGAAGATCATCAGATTCTGATGACTCGGATAGTGATTCCTACAAACGCCGTCCAAGTAGCAGTAGTAATAGTCGCCGTCGCTCTCGACGCCGTGACTCGGATAGTTCCGATGACAGTGATGACGGTGGTAAGAAAAGAAAGTCGGGGAGTGAAATTACTGAAGATGATATAAACCAGTATAAAGCCAAAAAAGCACAGAGAAGGGCACTGAAAGTTGCGAAGAAATTGAAGACCAATACGGTGTCTGGTTATTCCAATGATTCCAATCCCTTTGGTGACTCTAATCTCAATGAGAAGTTTGTTTGGCGCAAGAAGATCGAGCGTGATGTTTCTCATGGTGTATCTATTGATGAATATTCAGTTAAAGCGGAGAAAAGGAGACAAAGTGAAAGGATGGCAGAAATCGAAAAAGTGAAAAAAAGAAGAGAGGAAAGGGCACTTGAGAAAGCACAACGTGAGGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAAAGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAGATTAGACTACGTGAAGGGCGTGCCAGGCCAATTGATGTCCTAACCAAGCAACTCAATGGCTCCGATGATTTGGATATAGAAATAAATGAACCATACTTGGTCTTCAAGGGTTTGACTGTGAAAGAAATGGATGAGCTTCATGATGACATCAAAATGCATTTGGACCTTGACAGGGCAACACCAACTCATGTAGAATATTGGGAGGCGCTTCTTGTGGTAGGTGATTGGGAGCTAGCTGAAGCTCGAAAAAAGGATGCACTAGATCGAGCCAGGGTGCGTGGAGAAGAACCTCCTTCTGAGCTGCTTACAGAAGAAAGGGGTCTGCATTCAAGTGTTGAGTCAGACGTGAAGGATCTTTTGCAGGGGAAGACACATGCAGAATTGGAGGCTTTACGGGTGCATATTGAGTCAGAAATGCGTACTGGTACTGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTGAAACACCTCCACATATATAAGGCCAAGGCTTGTTTGAAGGAAATTCATGCTAAAATGTTACGTAAGCATTTGCACCGCCTCGAGCGACCAGTGGAGGGTGACAATCAATTGGAGAACACTCTTGCTATGATACCTGAGGAAAATGAGGAGGAGAAGGAGGAAGATGATGAGGACGATGTCAAAGTTCAATCTGCAGATGAATCATACTCACCAGAACCCATTAGAGAGGATCAAGAAGCTGAGGATGAGGCTGGATCATTTTCACCAGAACTGTTTCATGGTGATGAAAATGAGGAAGCTATTGACCCTGAGGAGGACAGAGCTATACTGGAGCGGAAACGTAAGGCTGTACTGGAAGAGCAGCAAAAACGAATTCAGGAAGCAATGGCGTCAAAGCCTGCTCCACCAGAAGATAATTTTGAGATGAAGGCCCTGAAAGCTATGGGAGCTATGGAAGATGGAGATGCAGTATTTGGATCTGGTGCTGAAGTGAACCTAGATTCTCAGGTTTATTGGTGGCATGACAAGTACAGGCCGAGGAAGCCGAAGTATTTCAACCGTGTTCACACCGGATATGAGTGGAACAAATATAATCAAACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGGTACAAATTTAATATTTTCTATCCTGATCTTGTAGACAAGATTAAAGCCCCAAACTACACTATTGAGAGGGATAGCAGCAATGGAGAGACTTGCATTATAACATTCCATGCAGGGCCACCATACGAAGACATAGCTTTCCGCATTGTGAACAAAGAATGGGAATATTCTCACAAGAAGGGTTTTAAGTGCACGTTTGAACGTGGTATTCTACATGTATACTTCAATTTCAAACGCCACCGCTACCGCAGATAA 1941 0.4389 MGRKGRRRRSSDSDDSDSDSYKRRPSSSSNSRRRSRRRDSDSSDDSDDGGKKRKSGSEITEDDINQYKAKKAQRRALKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSHGVSIDEYSVKAEKRRQSERMAEIEKVKKRREERALEKAQREEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKQLNGSDDLDIEINEPYLVFKGLTVKEMDELHDDIKMHLDLDRATPTHVEYWEALLVVGDWELAEARKKDALDRARVRGEEPPSELLTEERGLHSSVESDVKDLLQGKTHAELEALRVHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLHRLERPVEGDNQLENTLAMIPEENEEEKEEDDEDDVKVQSADESYSPEPIREDQEAEDEAGSFSPELFHGDENEEAIDPEEDRAILERKRKAVLEEQQKRIQEAMASKPAPPEDNFEMKALKAMGAMEDGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIERDSSNGETCIITFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0128 646 MobiDBLite consensus disorder prediction 396 411 - -
Lal20g0128 646 MobiDBLite consensus disorder prediction 32 70 - -
Lal20g0128 646 MobiDBLite consensus disorder prediction 1 102 - -
Lal20g0128 646 MobiDBLite consensus disorder prediction 394 455 - -
Lal20g0128 646 MobiDBLite consensus disorder prediction 85 102 - -
Lal20g0128 646 PANTHER BNAC05G02180D PROTEIN 10 646 - -
Lal20g0128 646 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 10 646 - -
Lal20g0128 646 Pfam Conserved mid region of cactin 168 365 IPR018816 -
Lal20g0128 646 Pfam Cactus-binding C-terminus of cactin protein 522 646 IPR019134 GO:0005515
Lal20g0128 646 MobiDBLite consensus disorder prediction 7 22 - -
Lal20g0128 646 Coils Coil 132 174 - -
Lal20g0128 646 MobiDBLite consensus disorder prediction 419 445 - -
Lal20g0128 646 SMART CactinC_cactus_3 522 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0128 Lal-Chr20 830116 841802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0128 K25058 - gmx:100780087 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0128 20 830116 841802 Lal20g0128 20 830116 841802 ECH