Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0123 ATGGAACCGGTCTATCATCTGAAACCGCATATCATGCCTTCTGCAATGACAATAGAAGATGATACAGCACCAGAAATCCAATATCAGAAAGGGGTGAAGCAGTTCTATGATAATGGCCATCTTCTTCAGAGGGTTCCTAAGAAGTACATACTTCCTCCTTCTGAACGACCTTCAACAAATATGGAGGAACCAAATGTTGCCACGCTAAACTTTCAGTTACCCACCATTGATTTTGTTGATTTGTTAGGTCCAAATAGGTCACATGCCCTTCAATCTTTAGGCAATGCTTGTGAGAAGTATGGATTTTTCCAGGTTGTGAATCATAGCATATCAGATGAAGTTGTAAGAAACATGTTAGATGTGAATGAGAGGTTCTTTGATCTTCCTATGGAGGAAAGGGCTAAGTACATGACAACTGATATGCATGCACCTGTTCGATATGGGACCAGCTTCAGCCAAACCAAAGACACTGTGTTCTGTTGGAGAGACTTCTTGAAATTACTGTCCCACCCTTTGTCTGATTTCATTCCTCTTTGGCCTTCTTCCCCTGTTGACTATAGGGAAGTGGCGGCTACCTATGCAGAAGAAACCAAAGAGTTGTTCCTTACTATAATGGAAGCTATCTTAGAGAGCCTAGGAATTAAGGAATCAAGCCAAGAAGGAAAAGACAATAATATTCTAAAAGACTTTGAGAATTGTAGCCATATGATGGTGGCTAATTTCTACCCACCATGTCCTCAACCTGACCTAACCCTTGGAATGCCACCTCATTCTGATTATGGCTTCCTCACACTTCTCTTACAAGATCAAGTTCAGGGATTGCAGATTCAATTCCAAGGCAAATGGCTTACCATTCAACCTATTCCTAATGCATTCATTGTCAATGTGGGTGATCACTTGGAGATATTTAGCAATGGAAAATACAAGAGCGTATTACATAGGGTGTTGGTGAATGAAGTGAAGAGTAGGGTATCAGTGGCTTCATTGCATAGTCTTCCCTTCAATTCCACTGTTAGACCGTCACCAAAACTCATTGACGAAGAGAATCCCAAGCGTTACATGGACACAAGTTTTGATAGTTTTATTTCTTATATTTCCACCAGAGAGACCAAAAATAAGGATTTCCTAGACTCTAGGAAATTGACCTGTGTACATAATGACAAACCAAATTAA 1173 0.4032 MEPVYHLKPHIMPSAMTIEDDTAPEIQYQKGVKQFYDNGHLLQRVPKKYILPPSERPSTNMEEPNVATLNFQLPTIDFVDLLGPNRSHALQSLGNACEKYGFFQVVNHSISDEVVRNMLDVNERFFDLPMEERAKYMTTDMHAPVRYGTSFSQTKDTVFCWRDFLKLLSHPLSDFIPLWPSSPVDYREVAATYAEETKELFLTIMEAILESLGIKESSQEGKDNNILKDFENCSHMMVANFYPPCPQPDLTLGMPPHSDYGFLTLLLQDQVQGLQIQFQGKWLTIQPIPNAFIVNVGDHLEIFSNGKYKSVLHRVLVNEVKSRVSVASLHSLPFNSTVRPSPKLIDEENPKRYMDTSFDSFISYISTRETKNKDFLDSRKLTCVHNDKPN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0123 390 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 21 381 - -
Lal20g0123 390 SUPERFAMILY Clavaminate synthase-like 32 367 - -
Lal20g0123 390 Pfam non-haem dioxygenase in morphine synthesis N-terminal 73 174 IPR026992 -
Lal20g0123 390 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 233 332 IPR005123 -
Lal20g0123 390 PRINTS Isopenicillin N synthase signature 93 110 - -
Lal20g0123 390 PRINTS Isopenicillin N synthase signature 257 278 - -
Lal20g0123 390 PRINTS Isopenicillin N synthase signature 292 318 - -
Lal20g0123 390 Pfam 2OG-Fe(II) oxygenase superfamily 234 330 IPR044861 -
Lal20g0123 390 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 381 - -
Lal20g0123 390 Gene3D - 23 364 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0123 Lal-Chr20 805110 810160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0123 29 361 Glycosyltransferase AT5G59530 34.311 3.99e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0123 - - lang:109348354 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0123 20 805110 810160 Lal20g0123 20 805110 810160 ECH