Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0122 ATGGCATTCCAAACACCACAGATCCACTTTGTCTTATTTCCATTAATGGCCCAAGGCCACATGATCCCTATGATAGACATTGCAAAAATATTGGTGCAGCAAAATGTTGTTGTTACACTAATCACAACACCACAAAATGCTACTCGTTTCAATTCATCCTTTGCTTCTTATATTGAGTCTGGTTTTCAGCTTAGATTAGTTGAAGTTCCATTCCCATTTGAAGAAGCTGGATTACCAAAAGGGTGTGAGAATCTTGATATGCTACCTTCACTTGGCACATCATTGAATTTCTTCACTGCACTTAGCTTTCTAAGGCAACCAGTGGAAAAACTATTTGAAGAGTTAACTCCTCCACCAAGTTGTATAATATCTGATATGTGTTTGCCATATACAATCCACATAGCTAAAAAATTCAACATTCCAAGGATTTCTTTTGGTGGAATAAGTTGCTTTTGTAACATATGTTTACATAATTTACGAATCCATAAGGTTCAGGAGAGCATAACAGATAAAAATGAGTACTTTGTTATGCCTGGTATCCCTGACAAAATTGAAATGACCTTAGCTCAAACACCATCACCAATGGATGAAAGCTGGAATGAGTTTGGTGCTGAAATGCTTGCAGCTGAAATGGATACTTATGGAACAATCATGAATACTTTTGAAGAGTTGGAGCCAGCTTATGCAAGAGAATACAAGAAGGTAAGGGGAGATAAAGTTTGGTGTATTGGCCCAGTATCACTTAGTAATAAGAATCACTTGGAAAAGGCTCAAAGAGGTAAAAATGCTTCCATTGATGAGTGGCAGCATCAAAAGTGGCTTGATTCTCAAAAGCCATGTAGTGTAATCTATGCATGCTTTGGAAGCCTATGCAATTTAACACCACTGCAATTGATGGAGCTTGGTTTAGCCTTAGAAGCATCAAAAAGACCCTTCATTTGGGTTATAAGGGAAAGTAGTAAGTCAGAAGCATTGGAAAAGTTGATTAAGGAAGATGGATTTGAGGAAAGAACAAACGGTGTTGGCCTTATAATTAGGGGTTGGGCTCCACAACTACTCATATTAGCACACCCTTCAACTGGAGGGTTTATAACACACTGTGGTTGGAACTCAACCCTAGAAGCAATATGTGCTGGTGTACCAATGATAACATGGCCATTATTTGCAGATCAATTTTTGAATCAAAATCTAGTTGTGCATGTGTTGAAAGTTGGAGTAAAGGTTGGGGTGGAGATTCCTGTTTTATGGGGTAATGAAGACAAAATTGGTGTGTTGGTTAAGAAAGAAGATGTTGAAAGAGCAATAGAAATGTTGATGGATGAGAATAGTGAATGTGAAGAAAGAAGAAAACGGGCTAGAGAGTTTGCAGATATGGCTAAAAATTCTGTGGAAAAAGGAGGATCTTCTCATTCCAACGTCACCTTGCTCATCCAAGATATATTGCTAAATTCCAACAAAGATATATGA 1467 0.3783 MAFQTPQIHFVLFPLMAQGHMIPMIDIAKILVQQNVVVTLITTPQNATRFNSSFASYIESGFQLRLVEVPFPFEEAGLPKGCENLDMLPSLGTSLNFFTALSFLRQPVEKLFEELTPPPSCIISDMCLPYTIHIAKKFNIPRISFGGISCFCNICLHNLRIHKVQESITDKNEYFVMPGIPDKIEMTLAQTPSPMDESWNEFGAEMLAAEMDTYGTIMNTFEELEPAYAREYKKVRGDKVWCIGPVSLSNKNHLEKAQRGKNASIDEWQHQKWLDSQKPCSVIYACFGSLCNLTPLQLMELGLALEASKRPFIWVIRESSKSEALEKLIKEDGFEERTNGVGLIIRGWAPQLLILAHPSTGGFITHCGWNSTLEAICAGVPMITWPLFADQFLNQNLVVHVLKVGVKVGVEIPVLWGNEDKIGVLVKKEDVERAIEMLMDENSECEERRKRAREFADMAKNSVEKGGSSHSNVTLLIQDILLNSNKDI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0122 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 481 - -
Lal20g0122 488 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 482 - -
Lal20g0122 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 281 401 IPR002213 GO:0008194
Lal20g0122 488 Gene3D Glycogen Phosphorylase B; 272 464 - -
Lal20g0122 488 Gene3D Glycogen Phosphorylase B; 6 271 - -
Lal20g0122 488 Coils Coil 428 448 - -
Lal20g0122 488 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Lal20g0122 488 CDD GT1_Gtf-like 9 462 IPR002213 GO:0008194
Lal20g0122 488 PANTHER GLYCOSYLTRANSFERASE 7 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0122 Lal-Chr20 802352 803818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0122 4 481 Glycosyltransferase AT2G36800 54.149 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0122 K13496 - gmx:100777426 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0122 20 802352 803818 Lal20g0122 20 802352 803818 ECH
Lal1g1791 1 20251915 20253375 Lal20g0122 20 802352 803818 LSH