Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0121 ATGGTTTCTGAAACAAACATTCCTCACTTCATCCTTTTTCCTCTAATGGCTCAAGGCCACATCATTCCAATGATGGACATTGCAAGACTCTTATCACAACGTGAAGTTAAAGTTACCATATTCACTACACCAAAAAATGCATCTCGTTTTACCTCAGTTATCTCTAGAGCTGTTTCTTCAGGCCTTCAAATCCAACTACTTTTACTCCAATTCCCATCACAAGAAGTAGGTTTACCTGAAGGGTGTGAGAATTTAGACATGGTTCCTTCAACAAATATGATGACTAATCTCTTCAATGGGATTACCTTGCTTCAAAATCAAGCAGAAGAACTCTTTGCTACACTAACACCAAAACCAAGTTGCATAGTTTCTGATTTTTGCATTCCTTGGACGTCTGAAATTTCTCAAAAGTATAACATTCCAAGGATTTCTTTCCATGGGTTTTGTTGCTTCTCCCTTCATTGCACTCATGTGGTACGTTCTTCAAAGATTGATGAGACCATAACTTCTGATTCAGAATATTTCACTATTCCTGGTCTACCTGACCAAATTCAAGTTACTAAACTTCAATTACCAGGAAATATAAGTGCTAGTTTAAATAAGATGGAGGATTTTAGGGAAAAGATGTCTGATGCTGAAACAAAATCATATGGTGTTATCATAAATACTTTTGAAGAGTTGGAGCAAGCATATGTCAATGAGTACAAGAAGGTGAAAAATGATAAGGTATGGTGTATTGGACCAGTTTCACTATGCAACAAAGATGAGTTGGATAAGGCTCAAAGAGGTAAAAAGGCCTCAATTAGTCAACACAATTGTTTGAAATGGTTAGATTTGCAACAACCTAAGTCTGTAGTTTATGTTTGTCTTGGAAGTATGTGCAACTTGATTCCTTCACAACTTATGGAGCTGGCTTTGGCCTTGGAATCAACACAAAGACCATTTATATGGGTCATTAGGGAAGGGAGTATGTTTAAGGAGTTAGAAAAGTTGATTAGTGAAGAAGGGTTTGAGGAAAGGATAGAAGGGAGAGGCCTTATAATTAAAGGTTGGGCACCACAATTGATAATATTATCACACCATGCCATTGGAGGGTTTTTAACACATTGTGGTTGGAATTCAACACTTGAAGGGATTAGTTCTGGTGTGCCAATGATTACTTGGCCATTATTTGGTGACCAATTCATGAATGAGAAGCTTGTTGTTCAAGTTTTGAAGATTGGTGTTAGCCTTGGTTTGAAGACTCCAATAAAATTTGGAGAGGAAGAGAAGAATGGTGTGTCATTGAAGAAGGATGATATTGAGAAAGCAATATGCATGGTTATGGATGAAGGTGGAGAAAGTGAAGAAAGAAGAAAAAGGGCCATAAAACTCAGTGAGATGGCAAAAAAAGCAGTTGAAAAAGGGGGTTCTTCTGATCTTAATATGACTTTGCTTATCCAAGAAATCATGCATTTACAAGCAAGTAAAGAGGAGGATATAAATTTTACTCCAAAAGAGATACAAGTTACATGTTGCAATTGA 1524 0.3681 MVSETNIPHFILFPLMAQGHIIPMMDIARLLSQREVKVTIFTTPKNASRFTSVISRAVSSGLQIQLLLLQFPSQEVGLPEGCENLDMVPSTNMMTNLFNGITLLQNQAEELFATLTPKPSCIVSDFCIPWTSEISQKYNIPRISFHGFCCFSLHCTHVVRSSKIDETITSDSEYFTIPGLPDQIQVTKLQLPGNISASLNKMEDFREKMSDAETKSYGVIINTFEELEQAYVNEYKKVKNDKVWCIGPVSLCNKDELDKAQRGKKASISQHNCLKWLDLQQPKSVVYVCLGSMCNLIPSQLMELALALESTQRPFIWVIREGSMFKELEKLISEEGFEERIEGRGLIIKGWAPQLIILSHHAIGGFLTHCGWNSTLEGISSGVPMITWPLFGDQFMNEKLVVQVLKIGVSLGLKTPIKFGEEEKNGVSLKKDDIEKAICMVMDEGGESEERRKRAIKLSEMAKKAVEKGGSSDLNMTLLIQEIMHLQASKEEDINFTPKEIQVTCCN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0121 507 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Lal20g0121 507 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 485 - -
Lal20g0121 507 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 403 IPR002213 GO:0008194
Lal20g0121 507 PANTHER GLYCOSYLTRANSFERASE 5 493 - -
Lal20g0121 507 Coils Coil 195 215 - -
Lal20g0121 507 Gene3D Glycogen Phosphorylase B; 274 467 - -
Lal20g0121 507 CDD GT1_Gtf-like 8 475 IPR002213 GO:0008194
Lal20g0121 507 PANTHER GLYCOSYLTRANSFERASE 5 493 - -
Lal20g0121 507 Gene3D Glycogen Phosphorylase B; 6 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0121 Lal-Chr20 792544 794067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0121 9 490 Glycosyltransferase AT2G36780 56.522 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0121 - - lja:Lj1g3v4690420.1 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0121 20 792544 794067 Lal20g0121 20 792544 794067 ECH