Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0083 ATGAAGCTTTCTACAAAACCCATTTCAAGTCCGGGTCGAACCGATAAGTTCCCACCACCATTGATGAGATTCTTGAGAAGCAATGTTGGAAGCAGAAGCAGAGGAAGGTCAAGGTCAAACTCTAGAACCATGTTTGTAAGGAAGAAAAACACAATCATTGAAACTACTCAAGAACCTACTTCACCTAAAGTCACATGCATGGGTCAAGTTAGAGTTAAACGCTCCTCCAAATCAAAACAACCAAATAGAACAACACGCCCCGCCGCAAGAGACGGTGCTCCGACACGGTGCCGATGCTTGTGGATCCGAAAAAGTGCTTTTCAAATCAAACTATGTCATTGTCAACCCGTTTGGCCTAAATGGGGTTTCTCGTTTAAAGTTGGAAGCTTCAGAAGAAAATCTAAAGAGATGAAAGAAGGTTCAACAAAAACAGAGGTAGAGGCAGAGCATGATGAAGAAGAAGAAGAAGAACCAGAACATGAAGAGAGAGTGATGAGTGGTGATGAAGCTTCTTCTTTTGCTTCAAAATCTTGCACCCCTCCAAGTAACGCTTTGTTATTAACTCGGTGTAGATCCGCACCTTATAGATCTTCTTCTTTGGCAAGTAGATTTTGGGGTTCACCGTTAAAGAGTGAAGAAGAAACAGAGGAAAAACAGGGGAATGAGATTGAAAACAGAGGATCCAGTTACTCAGAAAATGAGAGACCGCATTCGGAGAGAAACCCAGTTTCTGACGAAGAAGGGAAAAGGGTATCTGAAAATGAAGAAAAGGTAGTATTTTTCAAAGAGCTTGAGGATTCACTCAGAGATAGAATCAGTTCAATGAACAACTCAGAAAAAGTTAATGAATTGAAGAAAAGAGAAAACGGAAAGGGAGATTGTGAAGCACCACGCCCTATAGTGCTTACCAGGTGCAAATCTGAACCGGCCAGAACCGGGTTTAAACTTGATCATGAGGTAAATAGTTTCTCGAAGAAGAGAAAGTTGGATTTAGATGATACCTCTGATTAA 1011 0.4125 MKLSTKPISSPGRTDKFPPPLMRFLRSNVGSRSRGRSRSNSRTMFVRKKNTIIETTQEPTSPKVTCMGQVRVKRSSKSKQPNRTTRPAARDGAPTRCRCLWIRKSAFQIKLCHCQPVWPKWGFSFKVGSFRRKSKEMKEGSTKTEVEAEHDEEEEEEPEHEERVMSGDEASSFASKSCTPPSNALLLTRCRSAPYRSSSLASRFWGSPLKSEEETEEKQGNEIENRGSSYSENERPHSERNPVSDEEGKRVSENEEKVVFFKELEDSLRDRISSMNNSEKVNELKKRENGKGDCEAPRPIVLTRCKSEPARTGFKLDHEVNSFSKKRKLDLDDTSD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0083 336 MobiDBLite consensus disorder prediction 71 91 - -
Lal20g0083 336 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 332 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 1 43 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 148 162 - -
Lal20g0083 336 Coils Coil 143 163 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 206 256 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 280 294 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 209 256 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 132 179 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 132 147 - -
Lal20g0083 336 PANTHER PROTAMINE P1 FAMILY PROTEIN 1 332 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 71 85 - -
Lal20g0083 336 MobiDBLite consensus disorder prediction 276 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0083 Lal-Chr20 541937 542947 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0083 - - lang:109347118 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0083 20 541937 542947 Lal20g0083 20 541937 542947 ECH
Lal11g1149 11 15199482 15200435 Lal20g0083 20 541937 542947 LSH
Lal1g1826 1 20595056 20596060 Lal20g0083 20 541937 542947 LSH