Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0073 ATGGCTACCAACAACAACAAAACCCAACCCAACCCCGACGATGACGCCACCGTCAAATCCAGCCCAACTCCGGCACTTGCTTCCGATTCCGGGAACGATTCCTCGCTTTCTGATGCCAACAAGAAGATTCGCCGTGCTGAGCGATTTGGGATTACTCTCCAATTGTCTGAAAAAGAGAAGCGTAATTCCCGAGCTGAAAGGTTTGGCACCACTAGTTTGACAAAAAAGGGATCAGAGACATCAAAAGCAGAAGAACTGAAGAGGAAGGCTAGGGCAAAGAGGTTTGGGGTGCCCGGTCCAACCACAACTGCTGATGAGGAGGCAAAGAAGAAAGCTCGGCTTGCCAGGTTTTCATCAGCTTCAAAGGCCGTTGCTGATCCTTCAGAGGAGGATAAAAGGAAAGCAAGAGCACTCAGGTTTTCAGATCCATTATCAGGTTCCTTATCACAAGTTAACGGCGAGGGAAGCATTGAGCCAGCAAAGCTGGAGGAGGAGATTGAATGGAAGCTTGCATTTTTTGTTGTAGGAAATTTTCTTCGTTTAAAGTTGAGAAAGATCCGTCGATTTGAGCTAGGTCTTCTTCTACACTTGCAGCTTTCGTCACAGTCACCAATCTCAATTTCTTACCAGGTTTCTCGGAAATATTCTGAAATGGAAGAGAAAAGAAATCAGCAGGAATCAAATGCTGCAGCATTAAGTGCCGGTGGAGAGCCCATTATTGTAATTGAAGGGGTGCCTGCCATAATTGCCAGCAGCAGCACTATTTCTCCCGATGATGCTTCAAGCACGGATCCTGCTATTGTAATTGATGGGGTGCCTGCCATAATTGCCAGCAGCAGCACTATTTCTCCCGATGATGCTTCAAGCACGGATCCTGCTATTGTAATTGATGGGGTGCCTGCCATAATTGCCAGCAACAGCACTATTTCTCCCGATGATACTTCAAGTGCGGACCCTGCTATTGTAATTGATGGGGTGCCTGCCATAATTGCCAGCAACAGCACTATTTCTCCCGATGATGCTTCAAGCATGGACCCTGCTATTGTAATTGATGGGGTGCCTGCCATAATTGCCAACAACGATAATATCCCTCCTGGTGATGCTTCCAACGCCGAGTCTGCTATTGTAATTAATGAGGTAGCAGACATGATTCACGGCAACAAAAATCTTCCTTGCAGTGAAGCTTCAAGTGCTGCTGAAATGCATGGGCCTTCTGGTTTGGGTAAATGGTTGGTAGGGAGAAAAGTTCGAAAGTGGTTCGAGGGACGATATTGTGCAGGCGAGGTAACAAAGTTTGAAAAATGGTACAGAGTTCTCTATGAAGATGGTGACTCTGAAGATCTTGATTGGCTGGAGTTAGAAGAGTTGCTTGTTCCTTCAGAAGGTAAGGTTCCGCTTAAGAAATTGGCAAAGAGGGTTATTAAGGAAAATAAGAAATCTGCTCGTAATTCAGTGAATAATATAGATTGTTCAGAAAATCCCCAAATCAAAATGTCAACAAACGGAAAGTACACCATACTTCCATATAGAGAGAAGCTTCATTTTAAAAATTAG 1554 0.4492 MATNNNKTQPNPDDDATVKSSPTPALASDSGNDSSLSDANKKIRRAERFGITLQLSEKEKRNSRAERFGTTSLTKKGSETSKAEELKRKARAKRFGVPGPTTTADEEAKKKARLARFSSASKAVADPSEEDKRKARALRFSDPLSGSLSQVNGEGSIEPAKLEEEIEWKLAFFVVGNFLRLKLRKIRRFELGLLLHLQLSSQSPISISYQVSRKYSEMEEKRNQQESNAAALSAGGEPIIVIEGVPAIIASSSTISPDDASSTDPAIVIDGVPAIIASSSTISPDDASSTDPAIVIDGVPAIIASNSTISPDDTSSADPAIVIDGVPAIIASNSTISPDDASSMDPAIVIDGVPAIIANNDNIPPGDASNAESAIVINEVADMIHGNKNLPCSEASSAAEMHGPSGLGKWLVGRKVRKWFEGRYCAGEVTKFEKWYRVLYEDGDSEDLDWLELEELLVPSEGKVPLKKLAKRVIKENKKSARNSVNNIDCSENPQIKMSTNGKYTILPYREKLHFKN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0073 517 PANTHER PROTEIN MODIFIER OF SNC1 11 7 159 IPR044209 GO:0016973
Lal20g0073 517 MobiDBLite consensus disorder prediction 38 66 - -
Lal20g0073 517 MobiDBLite consensus disorder prediction 78 92 - -
Lal20g0073 517 MobiDBLite consensus disorder prediction 1 37 - -
Lal20g0073 517 MobiDBLite consensus disorder prediction 1 109 - -
Lal20g0073 517 Pfam Tho1/MOS11 C-terminal domain 37 69 IPR040746 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0073 Lal-Chr20 486519 492545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0073 K18732 - lang:109333670 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1136 11 15085133 15089284 Lal20g0073 20 486519 492545 LSH
Lal1g1836 1 20654266 20656800 Lal20g0073 20 486519 492545 LSH