Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0072 ATGATTATCATGGAATCTTTGATCTTCAAAACCATGCCACCCCAGAACCACACCTTTCTTCAGCAACAGGTTCTTCCATTTGGGGACATGGATTTGACATGGTTGGTTGAGTTTATGAAGGGCATGGTGAAGCCAGTGGCAGCTACTGCGGTGGTGTTTCTGGCTGTGGCCTTGTCCTTCTCACAGAAGCTTGGAATGGAAGTGGAAATGGTTGTTGCAATTTTGAGGGCATTTATTCAACTCTCTATTATTGGGTTTGTATTGCAGTTCATTTTCAATCAAGATAACGCTGGATGGATCCTTCTAGCATATCTTTTCATGGTTTCTATTGCTGGTTATACAGCTGGGCAGCGTGCAAAACAAGTACCTCGTGGGAAGCTTGTGGCTGGTGCTTCAATTCTGACAGGAACAACAGTGACTTTGTGTGTGCTAGTGTTACTGAATGTGTTCCCTTTCACTCCAAGATATATTATCCCTGTAGCAGGAATGATGGTTGGTAATTCCATGACAGTAACTGGAGTTACCATGAAACGACTCCGCGACGACATTAAAGTTCAAATGAACTTGGTAGAGACAGCATTGGCTCTAGGTGCAACACCAAGACAAGGGACACATGAGCAAGTGAAAAGGGCATTGATCATAGCACTTTCTCCTGTAGTGGACAACACCAAAACAGTGGGTTTAATATCTCTTCCTGGGGCAATGACTGGTCTCATTATGGGAGGAGCTTCCCCCTTAGAAGCCATTCAATTACAAATTGTGGTAATGAATATGATGATAGGATTGATATTAAGTGCAGATGTAACGTTAAGTTCAATGGAGATATTTACAACCCATGAGTGGTTAAAAGCCACACCAATTGTATATTTCAAATGCAAAGAGGAGAACAAGACTGTATTGCCTGATGTCAAGAAAAAGCATACCTTTTATTCTTTCAAGAGTGAAGAGTCTTGGCAGCCTTTGACTAATTTTTCAAGTAAAAAATGCAAGCGGTGTGGATTATACGAGGAAGATCGCCTTCTTTCAGATGATGTGTTTGACGAATGGGAGTTTTGCCCTTCTGATTTTACTGCTCCTGATGGAAAATATGTCCGGGTCAAGGAAAAAGAATTTAATGCTACTTTCCTGTGCCCAGAGTGCTTATCATTGGCTGGGAGTTCTAGTTCTACCTCTGGTATTGGTATTGCTTCACCAGACGGGAAGGATAATAGAAAAACAGTTCATATAGTGATTGTGGTCGTGTTAAGTGTTTTGGTCTCAGCTATAGTCATTGTGGGAGCAGTGAGGGCATTTAAGTACTGGCAAAAGAAGAAGAGGGAACAAGATCAGGCTCGGTTTTTAAAGTTATTTGAAGACGGAGACGACATTGAGGATGAGCTAGGCCTTGGTACTATACTATAG 1401 0.419 MIIMESLIFKTMPPQNHTFLQQQVLPFGDMDLTWLVEFMKGMVKPVAATAVVFLAVALSFSQKLGMEVEMVVAILRAFIQLSIIGFVLQFIFNQDNAGWILLAYLFMVSIAGYTAGQRAKQVPRGKLVAGASILTGTTVTLCVLVLLNVFPFTPRYIIPVAGMMVGNSMTVTGVTMKRLRDDIKVQMNLVETALALGATPRQGTHEQVKRALIIALSPVVDNTKTVGLISLPGAMTGLIMGGASPLEAIQLQIVVMNMMIGLILSADVTLSSMEIFTTHEWLKATPIVYFKCKEENKTVLPDVKKKHTFYSFKSEESWQPLTNFSSKKCKRCGLYEEDRLLSDDVFDEWEFCPSDFTAPDGKYVRVKEKEFNATFLCPECLSLAGSSSSTSGIGIASPDGKDNRKTVHIVIVVVLSVLVSAIVIVGAVRAFKYWQKKKREQDQARFLKLFEDGDDIEDELGLGTIL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0072 466 PANTHER ALUMINUM SENSITIVE-LIKE PROTEIN 3 263 - -
Lal20g0072 466 TIGRFAM TIGR00245: TIGR00245 family protein 50 260 IPR005226 -
Lal20g0072 466 Pfam Uncharacterised protein family (UPF0014) 46 266 IPR005226 -
Lal20g0072 466 PANTHER UPF0014 INNER MEMBRANE PROTEIN YBBM-RELATED 3 263 IPR005226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0072 Lal-Chr20 479069 484333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0072 K02069 - gmx:100814304 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1134 11 15074269 15076301 Lal20g0072 20 479069 484333 LSH