Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0057 ATGTCAAAAATAACAATTGCTAACACAAGAGCAAATATATGGCGATTTCGTTTAATCTCAGCACTAAGAACAACTTTGGCATGCACCATTGTTGGTTGCACTTCACTCTATTCCCCTGAACCTCTAAGACAATACCTTGAATTCCCAGCTTTTTCTTATGTGACAACAATCCTATTAGTCTCAGATGCAACACTTGGTGACACATTAAGAGGTTGTTGGCATGTCCTAATTGCAACACTCCAGGTTATGATCTTATCATTGCTTAGTCTTCATGTAAAAGGACCTCAGTACTTCAATAACCGAGTGGCAGCACTGGCGGTGGCGGTTTCTTCCTTCATGGTGGCACTGCCAGAATCAGCACACTTGATGACTAAGAGGATTGCATTTGGGCAACTTGTGATTGTTTATGTGAGCACAGTGATACATGGTGCACAAAGAGGAGTGCTCATGCATACAATTCATGTGGCATCATCCACAGCACTTGGAGCTATTGCTTCTGTTTTGGCCATGTTGTTCCCATATCCTAGGCTTGCCTATTATGAGGCAAGACAGTTCTACAAAATATACACTGAGAATGCTGCTGAGAGGTTCAGTTGCACTTTGGAGGCCATAACTGCATCAGATAATTCAACTGCTCTTGGTTTCTCCACTCAAGCCAAGTCCTTCTCCATAGTTGGAGCCAAGCTTCTCCACAGTATCCGAAGTAACCTGGATGGAATGCAATGGGAAAGGCCTCAGACAAGATTTTGCAATCCCCATAGCATTGATCTGGAAGAAAAACTGCAAGACTTGGACATACCAATAAGAGGGATGAACATTGCTCTATCAAGTTGCACTTCTTTTCCTGTTAGTGTCATTGATGAGAAGCTCAGAGGTATCTTGCTCAACTGCAGAGGAAAATTCAGCCAAAAACTGGACCAGAAAGCTAGGCGCTTTGCTCCTATTGATGCAACAACAACTGCAGAGAGCAAGAAAGAAATCTTTAACAGAAACCTCACCATAGCTGATAAAGATCTCCCAACCTCATTCTTTCTATACTGTGTACAACTTCTCCTGGATGACTTGCCCCTTGCAAAGAAAACTGAACACCTAGTTCAAAGAACTCAGAAAACCAGAATGATCAGAGAGTTTGTTATGAGCTTCATGCCCAGCAAGCACAACTTTGTGTTTGCATTCAAGTGCTCACTTTCATTAGGTCTTGCTGTGTTGTTTGGTTTAATATACAACAAGGAAAATGGATATTGGTCAGGGCTGACAATTGCCATCAGTTTCGTGACTGGACGACAACCAACATTCTCAGCTGCGAATGCGCGAGGGCAAGGAACAGCAATGGGATCGATCTACGGTGTCCTCTGTTGCTTCATTTTCCAAAGACTTGGGGATTTAAGGTTCTTGTCTCTTCTACCATGGGTGGTTTTCTCTTCTTTTCTAAGGCATAGTAGAATGTATGGACAAGCTGGTGGGATTTCAGCAGTTATAGGTGCCTTATTAATCCTTGGTAGGAAACACTATGGCCCTCCAACTGAGTTTGCATTTGCTCGAATCACAGAGGCCACAATAGGACTCATTTGCTTCATATTGGTAGAGATTCTTTCACAGCCCTCAAGAGCTCAAACTCTAGCAAAATCAGAACTTTCTAAGAGCTTGAGGGCACTTCAAGATTGCATCGGTAGGATTCCAACAACTATACCCAGCCAAAGAGATATGCAATCTTCAAGTTCTCAAGCATTGAGAGAAGGACAGCAGAGGCTGAAAGCCCATGTGTGTCAATTAGAAGAGTTTACAGCAGAAGCTAAGTTGGAACCTAATTTCTGGTTCCTGCCATTTCATAGTGGCTGCTACAGTAAGATGCTGGAATCTCTATCAAGGATGGTGGACATTTTAATTTTTGTGGCATACTCAATGGAACAGGTCACAAGATTGTCCCAGAAAGATGGAGTATGTAGGGTGGACTTCCAAGAAAGAATGAAGGAGAATATAGAGCTTTTCAAGAACAGATTTGGCATCACACTGAAATGTCTCGAAGAGATAATTAGGATGAAATCCCTTCGGAAACTTGAATATGATTTGAGGATTAAAAATCTTCCTTGTGACGTTGAATCAGGAGAATATGCCAATGCAGAAGCATATATAACATTGGGTGGAAATGAAGAGGTTGATGGCATTACAGGGTCTTTCCTCAAACTTCTTGAGGAGATGGCTAATAAAACTCATTTTAACAAAGATGATGAGATGATTAAAGACCAACAACTCCTTCTTCATTATAGTTGCCTTGGATTCTGCATCAATAGCTTGATGAGAGAAACTTTAAAGATTGAAAGTGAAGTGAAAGAACTAGTTATATGGGAGAATGGCTCGATTGAAGTAAATTTCAAAGAAATTTATTGTAAGATCAGCACCCTATGTTCACAGTAG 2415 0.4137 MSKITIANTRANIWRFRLISALRTTLACTIVGCTSLYSPEPLRQYLEFPAFSYVTTILLVSDATLGDTLRGCWHVLIATLQVMILSLLSLHVKGPQYFNNRVAALAVAVSSFMVALPESAHLMTKRIAFGQLVIVYVSTVIHGAQRGVLMHTIHVASSTALGAIASVLAMLFPYPRLAYYEARQFYKIYTENAAERFSCTLEAITASDNSTALGFSTQAKSFSIVGAKLLHSIRSNLDGMQWERPQTRFCNPHSIDLEEKLQDLDIPIRGMNIALSSCTSFPVSVIDEKLRGILLNCRGKFSQKLDQKARRFAPIDATTTAESKKEIFNRNLTIADKDLPTSFFLYCVQLLLDDLPLAKKTEHLVQRTQKTRMIREFVMSFMPSKHNFVFAFKCSLSLGLAVLFGLIYNKENGYWSGLTIAISFVTGRQPTFSAANARGQGTAMGSIYGVLCCFIFQRLGDLRFLSLLPWVVFSSFLRHSRMYGQAGGISAVIGALLILGRKHYGPPTEFAFARITEATIGLICFILVEILSQPSRAQTLAKSELSKSLRALQDCIGRIPTTIPSQRDMQSSSSQALREGQQRLKAHVCQLEEFTAEAKLEPNFWFLPFHSGCYSKMLESLSRMVDILIFVAYSMEQVTRLSQKDGVCRVDFQERMKENIELFKNRFGITLKCLEEIIRMKSLRKLEYDLRIKNLPCDVESGEYANAEAYITLGGNEEVDGITGSFLKLLEEMANKTHFNKDDEMIKDQQLLLHYSCLGFCINSLMRETLKIESEVKELVIWENGSIEVNFKEIYCKISTLCSQ 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0057 804 Pfam Fusaric acid resistance protein-like 400 528 - -
Lal20g0057 804 PANTHER F3L24.34 PROTEIN 9 791 - -
Lal20g0057 804 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 9 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0057 Lal-Chr20 393144 399388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0057 - - aprc:113863134 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0057 20 393144 399388 Lal20g0057 20 393144 399388 ECH
Lal1g1856 1 20831257 20836449 Lal20g0057 20 393144 399388 LSH